FlyBase Aberration Report: Dmel\Df(3L)vin2

General Information

Symbol

Df(3L)vin2

Species

D. melanogaster

Name

Deficiency (3L) vin

FlyBase ID

FBab0002454

Feature type

chromosomal_deletion

Also Known As

Df(3L)vin², vin2

Computed Breakpoints include

67F2;68D6

Features within 67F2--68D6

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Klein and Campos-Ortega, 1997)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Mogila, 1998.3.19, Klein and Campos-Ortega, 1997, Harbecke and Lengyel, 1995, Murakami et al., 1995, Pauli et al., 1995, Landecker et al., 1994, Phillips and Shearn, 1990, Lehner and O'Farrell, 1989)

Breakpoints

67F2-67F3;68D6

(Mogila, 1998.3.19, Harbecke and Lengyel, 1995, Murakami et al., 1995, Pauli et al., 1995, Landecker et al., 1994, Phillips and Shearn, 1990, Lehner and O'Farrell, 1989)

67F2;68D6

(Klein and Campos-Ortega, 1997)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

simj << bk1 << Fuc << pto << bk2 << CycA

Genetic mapping information

Comments

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

(Marygold et al., 2007)

Comments on Cytology

Ref: FBrf0031168.

(Phillips and Shearn, 1990)

Left limit of break 1 from polytene analysis (FBrf0049390) Right limit of break 1 from inclusion of l(3)rI075 (FBrf0067338) Limits of break 2 from polytene analysis (FBrf0049390)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Fuca

(Matthews, 2001.8.28)

grr

(Mogila, 1998.3.19)

klu

(Spradling et al., 1999, Klein and Campos-Ortega, 1997, BDGP Project Members, 1994-1999)

l(3)68Cd

(Hoogwerf et al., 1988)

l(3)68Ce

(Hoogwerf et al., 1988)

l(3)68Cf

(Hoogwerf et al., 1988)

l(3)68Cg

(Hoogwerf et al., 1988)

l(3)68Ch

(Hoogwerf et al., 1988)

l(3)68Da

(Hoogwerf et al., 1988)

l(3)68Db

(Hoogwerf et al., 1988)

l(3)68Dc

(Hoogwerf et al., 1988)

l(3)05408

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)S027607

(Szeged Stock Center, 1998-)

l(3)S030305

(Szeged Stock Center, 1998-, Deak et al., 1997)

l(3)S042228

(Szeged Stock Center, 1998-)

l(3)S059011

(Szeged Stock Center, 1998-)

Mocs1

(Schott et al., 1986)

Pfdn2

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

pto

(Castrillon et al., 1993)

(Schott et al., 1986, Akam et al., 1978)

(Spradling et al., 1999, BDGP Project Members, 1994-1999, Hoogwerf et al., 1988)

S(CycE^JP)3.2

(Brumby et al., 2004)

Sod1

(Schott et al., 1986)

SuUR

(Makunin et al., 2002)

tna

(Spradling et al., 1999, Szeged Stock Center, 1998-, BDGP Project Members, 1994-1999)

vin

(Hoogwerf et al., 1988)

Partially deleted / disrupted

Molecular Data

Completely deleted

JIL-1

(Zhang et al., 2003)

mRpL2

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

app

(Hoogwerf et al., 1988)

byn

(Murakami et al., 1995, Kispert et al., 1994)

can

(Lin et al., 1996)

cpo

(BDGP Project Members, 1994-1999)

CycA

(Lehner and O'Farrell, 1989, Hoogwerf et al., 1988)

E(z)

(Phillips and Shearn, 1990)

Est-6

(Hoogwerf et al., 1988)

eyg

(Hoogwerf et al., 1988)

hay

(Regan and Fuller, 1988)

l(3)68Eb

(Hoogwerf et al., 1988)

l(3)68Ec

(Hoogwerf et al., 1988)

l(3)68Ed

(Hoogwerf et al., 1988)

l(3)68Ee

(Hoogwerf et al., 1988)

l(3)68Ef

(Hoogwerf et al., 1988)

l(3)68Eg

(Hoogwerf et al., 1988)

l(3)68Fa

(Hoogwerf et al., 1988)

l(3)68Fb

(Hoogwerf et al., 1988)

l(3)68Fc

(Hoogwerf et al., 1988)

l(3)68Fd

(Hoogwerf et al., 1988)

l(3)68Fe

(Hoogwerf et al., 1988)

l(3)69Aa

(Hoogwerf et al., 1988)

l(3)69Ab

(Hoogwerf et al., 1988)

l(3)69Ac

(Hoogwerf et al., 1988)

l(3)69Ad

(Hoogwerf et al., 1988)

l(3)69Ae

(Hoogwerf et al., 1988)

l(3)69Af

(Hoogwerf et al., 1988)

l(3)69Ag

(Hoogwerf et al., 1988)

l(3)69Ba

(Hoogwerf et al., 1988)

l(3)69Bb

(Hoogwerf et al., 1988)

l(3)69Bc

(Hoogwerf et al., 1988)

l(3)69Bd

(Hoogwerf et al., 1988)

l(3)00707

(BDGP Project Members, 1994-1999)

l(3)03691

(BDGP Project Members, 1994-1999)

l(3)s2714

(BDGP Project Members, 1994-1999)

Lsp2

(Hoogwerf et al., 1988)

Nrx-IV

(Hoogwerf et al., 1988)

Rdl

(ffrench-Constant and Roush, 1991)

rols

(Chen and Olson, 2001)

simj

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

Molecular Data

Pi3K68D

(MacDougall et al., 2004)

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

(Marygold et al., 2007)

Df(3L)vin2 mutants show defects in head involution. The mouth hooks are present but the labrum and epistomal sclerites are missing and at least part of the cephalopharyngeal skeleton remains at the surface of the embryo.

Df(3L)vin2 embryos show reduced levels of cell death, as evidenced by lower levels of Decay protein activity.

(Scuderi et al., 2006)

The level of 7-monoenes is normal in heterozygous males. The level of 7,11-dienes is significantly decreased in heterozygous females compared to controls.

(Wicker-Thomas and Jallon, 2000)

No second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1.

(Halsell and Kiehart, 1998)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Homozygous embryos show variable defects in germband retraction, and some are twisted. Malpighian tubule elongation is incomplete.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion enhances the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Fertile when heterozygous with hay^nc2.

(Regan and Fuller, 1988)

Stocks (2)

Bloomington

2547

Df(3L)vin2, ru¹ hry¹ gl² e⁴ ca¹/TM3, Sb¹

Kyoto

107396

Df(3L)vin2, ru¹ hry¹ gl² e⁴ ca¹/TM3, Sb¹

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

Df(3L)vin-2

(Campbell et al., 1986)

Df(3L)vin2

(Monribot-Villanueva et al., 2013, Casso et al., 2008, Crest et al., 2007, Scuderi et al., 2006, Wilson et al., 2006, He et al., 2005, MacDougall et al., 2004)

Df(3L)vin²

(Wicker-Thomas and Jallon, 2000, Murakami et al., 1995, Kispert et al., 1994, Schott et al., 1986)

vin2

(Yamaguchi et al., 1999, ffrench-Constant and Roush, 1991, Fuller, 1986)

Name Synonyms

Deficiency (3L) vin

Secondary FlyBase IDs

References (59)

Report Sections

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