FlyBase Aberration Report: Dmel\Df(3R)H-B79

General Information

Symbol

Df(3R)H-B79

Species

D. melanogaster

Name

FlyBase ID

FBab0002586

Feature type

chromosomal_deletion

Also Known As

Df(3R)H^B79, H^B79

Computed Breakpoints include

92B3;92F13

Features within 92B3--92F13

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

P-element activity

(Maier et al., 1992, Bang et al., 1991)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Featherstone and Cook, 2004.5.18, Maier et al., 1992, Bang et al., 1991, Wustmann et al., 1989)

Breakpoints

92B-92C;92F

(Wustmann et al., 1989)

92B3-92B11;92F8-92F13

(Bang et al., 1991)

92B2-92B3;92F13-93A1

(Maier et al., 1992)

92B;92F

(Featherstone and Cook, 2004.5.18)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

bk1 << cdc2c << bk2

Genetic mapping information

Comments

Does not delete CG17208. CG4323 may be deleted. FlyBase curator comment: This PCR-based molecular mapping of Df(3R)H-B79 contradicts both the pre-existing cytological and complementation data for Df(3R)H-B79. This raises the possibility of Df(3R)H-B79 being a e.g. a transposition into the heterochromatin, with associated PEV, rather than a straightforward deficiency.

(Featherstone and Cook, 2004.5.18)

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0053826) Right limit of break 1 from polytene analysis (FBrf0057132) Left limit of break 2 from polytene analysis (FBrf0057132) Right limit of break 2 from polytene analysis (FBrf0053826)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

bon

(Beckstead et al., 2001)

Cdk2

(Secombe et al., 1998)

GluRIID

(Qin et al., 2005)

(Maier et al., 1992, Bang et al., 1991)

l(3)10585

(Spradling et al., 1999)

Pi3K92E

(Williams et al., 2006)

Stat92E

(Spradling et al., 1999)

su(comp)3R-1

(Tyler et al., 2007)

Syp

(Spradling et al., 1999)

trem

(Page et al., 2007)

Partially deleted / disrupted

Molecular Data

Completely deleted

CG5115

(Featherstone and Cook, 2004.5.18)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

bnl

(Spradling et al., 1999)

Molecular Data

Calx

(Wang et al., 2005)

Gfrl

(Featherstone and Cook, 2004.5.18)

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Does not delete CG17208 (molecular determination) Molecular data: CG4323 may be deleted. Molecular data: FlyBase curator comment: This PCR-based molecular mapping of Df(3R)H-B79 contradicts both the pre-existing cytological and complementation data for Df(3R)H-B79. This raises the possibility of Df(3R)H-B79 being a e.g. a transposition into the heterochromatin, with associated PEV, rather than a straightforward deficiency.

(Featherstone and Cook, 2004.5.18)

Phenotypic Data

In combination with other aberrations

No effect on In(1)w^m4h position-effect variegation.

(Wustmann et al., 1989)

NOT in combination with other aberrations

Shows a H mutant phenotype: postvertical and orbital bristles are missing and wing vein L5 thins out as it approaches the wing margin.

(Featherstone and Cook, 2004.5.18)

The Df(3R)H-B79 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Heterozygosity for Df(3R)H-B79 results in 2.4% X chromosome nondisjunction and 2.4% fourth chromosome nondisjunction in In(1)FM7/X ; sv^spa-pol females.

(Harris et al., 2003)

Stocks (2)

4962

107974

Notes on Origin

Discoverer

U. Tepass and J.A. Campos-Ortega.

(Maier et al., 1992)

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

Df(3R)B79

(Bang et al., 1991)

Df(3R)H-B79

(Weiss et al., 2012, Ekas et al., 2010, Barbash and Lorigan, 2007, Page et al., 2007, Tyler et al., 2007, Williams et al., 2006, Wang et al., 2005, Featherstone and Cook, 2004.5.18)

Df(3R)H^B79

(Beckstead et al., 2005, Beckstead et al., 2001, Wustmann et al., 1989)

H^B79

(Go and Artavanis-Tsakonas, 1998, Bang et al., 1991)

Name Synonyms

Secondary FlyBase IDs

References (31)

Report Sections

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