FlyBase Aberration Report: Dmel\Df(3R)crb87-4

General Information

Symbol

Df(3R)crb87-4

Species

D. melanogaster

Name

FlyBase ID

FBab0002748

Feature type

chromosomal_deletion

Also Known As

Df(3R)crbS87-4, Df(3R)S87-4

Computed Breakpoints include

95D11-95E2;96A2

Features within 95D11--96A2

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Tepass and Knust, 1990)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Cobb, 1996, Pereira et al., 1995, Kellerman and Miller, 1992, Atkinson et al., 1991, Tepass and Knust, 1990, Wustmann et al., 1989)

Breakpoints

[];95F15--96A1

(Wustmann et al., 1989)

95E8-95F1;95F15

(Cobb, 1996, Tepass and Knust, 1990)

95E8-95F1;95F15-96A2

(Atkinson et al., 1991)

95E8;96A2

(Kellerman and Miller, 1992)

95D1-95D2;95F15-96A1

(Pereira et al., 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Atg6 << bk1 << Syx1A << Csr << bk2 << Indf

Genetic mapping information

Comments

Comments on Cytology

Left limit of break 1 from non-inclusion of Atg6 (FBrf0067338) Right limit of break 1 from inclusion of Syx1A (FBrf0067338) Left limit of break 2 from polytene analysis (FBrf0056451) Right limit of break 2 from polytene analysis (FBrf0055080)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

BRWD3

(Muller, 2005, Spradling et al., 1999, BDGP Project Members, 1994-1999)

crb

(Spradling, 1999.12.9, Szeged Stock Center, 1998-, Cobb, 1996, BDGP Project Members, 1994-1999)

csn

(Perotti et al., 2001)

Csr

(Pereira et al., 1995)

E(ftz)1819

(Kankel et al., 2004)

E(rst)D17

(Tanenbaum et al., 2000)

E(rst)H94

(Tanenbaum et al., 2000)

E(rst)K45

(Tanenbaum et al., 2000)

jar

(Bienz, 2003.9, Spradling et al., 1999, BDGP Project Members, 1994-1999, Kellerman and Miller, 1992)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Bienz, 2003.9)

(Szeged Stock Center, 1998-)

l(3)S005343

(Szeged Stock Center, 1998-)

p38a

(Weber et al., 2000, Paricio et al., 1999)

shps

(Tomaru et al., 2018)

SMC6

(Silva et al., 2006)

Spps

(Brown and Kassis, 2010)

Syx1A

(Spradling et al., 1999, Littleton et al., 1998, BDGP Project Members, 1994-1999)

twin

(Morris et al., 2005)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

aor

(Cobb, 1996)

asp

(Cobb, 1996)

Atg6

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

Indf

(Cobb, 1996)

slo

(Cobb, 1996, Atkinson et al., 1991)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

Df(3R)crb87-4 is lethal in combination with Df(3R)jar³²².

(Morrison and Miller, 2008)

jar^Hsp83.PH cannot rescue the lethality of Df(3R)jar³²² homozygotes or of Df(3R)jar³²²/Df(3R)crb87-4 animals, indicating that the lethality seen in these animals is not due to loss of jar function.

(Morrison and Miller, 2008)

No effect on In(1)w^m4h position-effect variegation.

(Wustmann et al., 1989)

NOT in combination with other aberrations

The Df(3R)crb87-4 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Homozygous embryos have abnormal gut morphology.

(Merabet et al., 2002)

Shows dominant enhancement of dominant haltere phenotype caused by Ubx¹⁹⁵ and Ubx^9.22.

(Burnette et al., 1999)

Suppresses the ommatidial polarity phenotype of dsh^hs.sev.B. Suppresses the ommatidial polarity phenotype of msn^EP549 when driven by Scer\GAL4^hs.2sev.

(Paricio et al., 1999)

Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.

(Coyne et al., 1998)

No second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1.

(Halsell and Kiehart, 1998)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Wild type nonanol phenotype; repulsion.

(Cobb, 1996)

Deficient embryos show an uninterpretable mutant midgut phenotype.

(Bilder and Scott, 1995)

Stocks (2)

Bloomington

2362

Df(3R)crb87-4, st¹ e¹/TM3, Ser¹

Kyoto

107283

Df(3R)crb87-4, st¹ e¹/TM3, Ser¹

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (12)

Reported As

Symbol Synonym

Df(3R) crb 87-4

(McCartney et al., 2006)

Df(3R)CRB87-4

(Morris et al., 2005)

Df(3R)S87-4

(Morrison and Miller, 2008, Weber et al., 2000, Kellerman and Miller, 1992, Atkinson et al., 1991)

Df(3R)S87.4

(Kozel and Miller, 1996)

Df(3R)crb-87-4

(Takacs et al., 2008)

Df(3R)crb-S87-4

Df(3R)crb87-4

(Kordyukova et al., 2020, Tomaru et al., 2018, Brown and Kassis, 2010, Wilson et al., 2006)

Df(3R)crb874

(Silva et al., 2006)

Df(3R)crb^87-4

(Littleton et al., 1998)

Df(3R)crb^S87-4

(Wustmann et al., 1989)

Df(3R)crbS87-4

(Firth et al., 2000, Carrera et al., 1998, Coyne et al., 1998, Cobb, 1996, Bilder and Scott, 1995)

Df(3R)crbS87⁴

(Brumby et al., 2004)

Name Synonyms

Secondary FlyBase IDs

References (47)

Report Sections

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