FB2024_03 , released June 25, 2024
Aberration: Dmel\In(3L)P
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General Information
Symbol
In(3L)P
Species
D. melanogaster
Name
Inversion (3L) Payne
FlyBase ID
FBab0005253
Feature type
chromosomal_inversion
Also Known As
In(3L)Payne, In(3L)E
Computed Breakpoints include

63B8-63B9;72E1-72E2

Features within 63B9--72E1 (Estimated cytology)
Genomic Maps
Sequence coordinates
3L:3,173,046..3,173,046 (In(3L)P:bk1)
(Miller et al., 2016, Corbett-Detig and Hartl, 2012)
3L:16,308,841..16,308,841 (In(3L)P:bk2)
(Miller et al., 2016, Corbett-Detig and Hartl, 2012)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
natural population
(Inoue and Igarashi, 1994, Inoue et al., 1994, Das and Singh, 1991, Singh and Das, 1990, Choi et al., 1984, Knibb et al., 1981, Ashburner and Lemeunier, 1976, Pipkin et al., 1976, Stalker, 1976, Zacharopoulou, 1974)
Class of aberration (relative to wild type)
chromosomal_inversion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_inversion
(Hasson and Eanes, 1996, Koryakov et al., 1994, Zabalou et al., 1994, Taberner and Gonzalez, 1991, Wohlwill and Bonner, 1991, Singh and Das, 1990, Choi et al., 1984, Craymer, 1984, Craymer, 1981, Knibb et al., 1981, Inoue and Watanabe, 1979, Ashburner and Lemeunier, 1976, Pipkin et al., 1976, Stalker, 1976, Zacharopoulou, 1974)
Breakpoints

63C;72E

(Koryakov et al., 1994, Zabalou et al., 1994, Taberner and Gonzalez, 1991, Singh and Das, 1990, Choi et al., 1984, Knibb et al., 1981, Stalker, 1976, Zacharopoulou, 1974)

63C;72C

(Pipkin et al., 1976)

63C;72E1-72E2

(Inoue and Watanabe, 1979, Ashburner and Lemeunier, 1976)

63B8-63B11;72E1-72E2

(Hasson and Eanes, 1996, Craymer, 1984, Craymer, 1981)

63B8-63B9;72

(Wohlwill and Bonner, 1991)
Causes alleles
MnMP
(Miller et al., 2020, Miller et al., 2016)
Carries alleles
Transposon Insertions
Formalized genetic data

l(3)63Bi << bk1 << l(3)63Bh

Genetic mapping information
Comments

The 5' end of this breakpoint corresponds to 3L:16308841 and the 3' end corresponds to 3L:16308845 (release 6 coordinates), meaning that 3bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)

The 5' end of this breakpoint corresponds to 3L:3173046 and the 3' end corresponds to 3L:3173053 (release 6 coordinates), meaning that 6bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)
Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0036539) Right limit of break 1 from polytene analysis (FBrf0054184) Limits of break 2 from polytene analysis (FBrf0029349)

Sequence Crossreferences
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Est-6
(Hasson and Eanes, 1996)
Hsp83
(Hasson and Eanes, 1996)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations

    Homozygous viable, although it often contains lethals of independent origin.

    Stocks (28)
    Notes on Origin
    Discoverer

    Payne, July 1917.

     

    One of 16 polymorphic inversions identified in the Drosophila Genetic Reference Panel (DGRP) freeze 2 lines.

    (Huang et al., 2014)

    Cosmopolitan inversion. Isolation: Rio Papaloapan, Mexico.

    (Pipkin et al., 1976)

    Recovered as: Cosmopolitan inversion.

    (Stalker, 1976)

    Isolation: Koleika, Greece.

    (Zacharopoulou, 1974)
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     

    Naturally occurring inversions have been categorised into classes according to their geographical distribution and frequencies, In(3L)P belongs to the common Cosmopolitan class.

    (Inoue et al., 1994)

    Cloning of the aberration breakpoints reveals that this inversion has not been derived recently and the distal breakpoint disrupts three transcripts (undefined).

    (Wesley and Eanes, 1994)

    Common cosmopolitan inversion.

    (Inoue and Igarashi, 1994, Das and Singh, 1991, Singh and Das, 1990, Zacharopoulou and Pelecanos, 1980)

    Distribution in Indian populations studied.

    (Das and Singh, 1991)

    Common cosmopolitan inversion. The distribution of this inversion in two populations from Valencia, Spain (one from a cellar and one from a vineyard) has been studied.

    (Taberner and Gonzalez, 1991)

    Cosmopolitan inversion.

    (Villar et al., 1991)

    Common cosmopolitan inversion (based on Australasian frequencies of distribution).

    (Knibb et al., 1981)

    Often associated with In(3R)P. Useful as a balancer for 3L. Allows only about 0.02% crossing over between ru and st. Balancers contain recessive lethals or Me. Balancers for all of chromosome 3 made by combining In(3L)P with In(3R)P or In(3R)C. Found in many wild populations (e.g., Warters, 1944, Texas Univ. Publ. 4445: 129-174; Oshima and Watanabe, 1965, D. I. S. 40: 88; Stalker, 1976, Genetics 82: 323-47; Mettler, Voelker and Mukai, 1977, Genetics 87: 169-76; Knibb, 1982, Genetics 58: 213-21).

    Synonyms and Secondary IDs (10)
    References (63)