FB2024_03 , released June 25, 2024
Aberration: Dmel\Df(2R)BSC3
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General Information
Symbol
Df(2R)BSC3
Species
D. melanogaster
Name
FlyBase ID
FBab0029423
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 48E12--49B6
Sequence coordinates
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{PZ}Cam03909
(Parks et al., 2004, Bogart and Cook, 2000.11.8)
P{lacW}k15501
(Parks et al., 2004, Bogart and Cook, 2000.11.8)
Mutagen
Delta2-3 transposase
(Bogart and Cook, 2000.11.8)
unequal recombination
(Bogart and Cook, 2000.11.8)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Parks et al., 2004)
Breakpoints

48E12-48F4;49A11-49B6

(Parks et al., 2004, Bogart and Cook, 2000.11.8)
Causes alleles
Carries alleles
bw1
(Bogart and Cook, 2000.11.8)
cn1
(Bogart and Cook, 2000.11.8)
speck1
(Bogart and Cook, 2000.11.8)
unchk15501
(Bogart and Cook, 2000.11.8)
w+mC
(Bogart and Cook, 2000.11.8)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Lac
(Llimargas et al., 2004)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In this case, the "Export to Hitlist" button at left will also be disabled.
    Phenotypic Data
    In combination with other aberrations

    Fails to complement Df(2R)BSC305.

    (Christensen and Cook, 2007.5.8)

    Inferred to overlap with: Df(2R)BSC305.

    (Christensen and Cook, 2007.5.8)
    NOT in combination with other aberrations
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     

    Not clear how much of the original P{lacW}k15501 remains, beyond the w+mC.

    (Bogart and Cook, 2000.11.8)
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Df(2R)BSC3
    (Clough et al., 2014, Galindo et al., 2014, O'Donnell and Bashaw, 2013, Fernandes and Rao, 2011, Christensen and Cook, 2007.5.8)
    Name Synonyms
    Secondary FlyBase IDs
      References (13)