FB2024_03 , released June 25, 2024
Aberration: Dmel\Df(2L)BSC41
Open Close
General Information
Symbol
Df(2L)BSC41
Species
D. melanogaster
Name
FlyBase ID
FBab0037635
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 28A4--28D9
Sequence coordinates
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{EP}EP946
(Parks et al., 2004, Deal et al., 2003.9.17)
P{lacW}l(2)k05404k05404
(Parks et al., 2004, Deal et al., 2003.9.17)
Mutagen
Delta2-3 transposase
(Deal et al., 2003.9.17)
recombination
(Deal et al., 2003.9.17)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Parks et al., 2004, Deal et al., 2003.9.17)
Breakpoints

28A4-28B1;28D3-28D9

(Parks et al., 2004, Deal et al., 2003.9.17)
Causes alleles
SnooBSC41
(Takaesu et al., 2006)
Carries alleles
cn1
(Deal et al., 2003.9.17)
dpyov1
(Deal et al., 2003.9.17)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments

Inverse PCR experiments using the Df(2L)BSC41 chromosome indicate that neither of the progenitor insertions (P{lacW}l(2)k05404k05404 and P{EP}EP946) remains in its original position, neither of the elements is intact and both insertions made jumps during the mobilisation scheme used to make Df(2L)BSC41. The proximal breakpoint is approximately 30kb proximal to the P{EP}EP946 insertion point.

(Takaesu et al., 2006)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
LanB1
(Deal et al., 2003.9.17)
mts
(Casso et al., 2008, Deal et al., 2003.9.17)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In this case, the "Export to Hitlist" button at left will also be disabled.
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     

    The deletion chromosome retained one or both mini-white markers from the P{lacW} and P{EP}EP1090 insertions used in the screen.

    (Deal et al., 2003.9.17)
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    Df(2L)7147
    (Chen et al., 2022)
    Df(2L)BSC41
    (Clough et al., 2014, Galindo et al., 2014, Casso et al., 2008, Takaesu et al., 2006)
    Name Synonyms
    Secondary FlyBase IDs
      References (10)