FB2024_03 , released June 25, 2024
Allele: Dmel\Tre1sctt
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General Information
Symbol
Dmel\Tre1sctt
Species
D. melanogaster
Name
scattershot
FlyBase ID
FBal0140960
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
sctt
Key Links
Genomic Maps

Allele class
Nature of the Allele
Allele class
Progenitor genotype
Cytology
Description

Mutation within intron 4 which results in altered splicing; intron/exon junctions through exon 4 are correctly spliced, however, directly following the altered splice acceptor site, 24bp are missing from exon 5. The next suitable splice AG acceptor site in the sequence is used and this change results in an in-frame deletion of 8 amino acids (RYILIACH) at the junction of the third transmembrane domain and the second intracellular loop of the protein.

Nucleotide substitution: A?T.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

A5674875T

Reported nucleotide change:

A?T

Comment:

A to T mutation in splice acceptor site.

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
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Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Germ cells fail to migrate and do not reach the gonad in embryos lacking maternal and zygotic Tre1 function (derived from homozygous females mated to hemizygous males). Homozygous embryos derived from females containing one copy of Tre1[+] do not show defects in germ cell migration. One paternally derived copy of Tre1[+] is also sufficient to rescue the germ cell migration defect of embryos derived from homozygous females, although these embryos have a defect in germ cell death, containing on average 7.0 germ cells ectopic to the gonads compared to 0.5 germ cells ectopic to the gonads in wild-type embryos.

Eggs laid by mutant mothers have a strong germ cell transgut migration defect.

97.8% of embryos derived from homozygous females mated to homozygous males show defects in germ cell migration; germ cell development appears to be normal prior to migration, but very few germ cells, if any, successfully migrate to and become incorporated into the gonad. The germ cells instead become dispersed throughout the posterior half of the embryo and continue to express a germ cell marker (indicating a failure in cell death). The mutant germ cell phenotype is recessive and a maternal effect (it is only seen in the offspring of homozygous females). When homozygous Tre1sctt females are mated to wild-type males, embryos of two classes are produced. The first class (60% of the embryos) shows the severe germ cell migration defect seen in the progeny of homozygous females mated to homozygous males and germ cells outside the gonad continue to express the germ cell marker. In the second class, an increased number of germ cells successfully migrate to the gonad, but many cells outside of the gonad continue to express the germ cell marker. This less severe class represents embryos which are paternally rescued by a wild-type copy of Tre1, indicating that while the germ cell migration defects are rescued by a paternal wild-type copy of Tre1, the cell death defect of ectopic germ cells outside the gonad is not rescued by a paternal wild-type copy of Tre1 (since the embryos contain an average of 7.7 germ cells outside the gonad and a higher number of germ cells in total than control embryos). Tre1sctt/Y males derived from homozygous females are fertile in only 33.7% of crosses. Only 41.7% of Tre1sctt/Tre1sctt females derived from homozygous females produce offspring (the remaining females fail to lay eggs). The ovaries are agametic in 57% of cases, rudimentary in 11% of cases and normal in 32% of cases. The gonadal defects correlate with fecundity. Tre1sctt/+ females derived from homozygous females are as fertile as wild type animals and 97% have normal ovaries.

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Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Fails to complement
Not rescued by
Comments

The germ cell migration defects of embryos derived from Tre1sctt homozygous females are rescued by Tre1+t10, Tre1RYAAAAAA, Tre1RYAAAACH or Tre1RAILIACH.

The germ cell migration defects of embryos derived from Tre1sctt homozygous females are not rescued by Tre1sctt.cKa or Tre1AYILIACH.

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Mutant
Wild-type
Stocks (0)
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External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (5)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (7)