FB2024_03 , released June 25, 2024
Clone: Dmel\IP01409
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General Information
Symbol
Dmel\IP01409
Species
D. melanogaster
Name
IP01409
FlyBase ID
FBcl0294440
Feature type
cDNA_clone
Computed gene(s)
Dmel\CG44002, Dmel\CR44003
 
Collection Status
BDGP
Known Problems
contains transposon sequences
FlyBase assessment
    Library
    IP_cDNA
    • IP cDNA library of D. melanogaster, isolated by an inverse-PCR screen (SLIP) from other cDNA libraries.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      embryonic stage
      organism

      Comment: 0-22 hr AEL

      (Rubin et al., 2000)
      larval stage
      organism
      (Rubin et al., 2000)
      pupal stage
      organism

      Comment: early pupae

      (Rubin et al., 2000)
      adult stage
      adult head
      (Rubin et al., 2000)
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      1,677
      NCBI
      BT022153
      Full Length sequence dataSequence Downloader
      AGGACCTATATCTTATTTTGAAAATAAAAATTTGTAGGAGAAATGAGAGCCGCACTCAAAGACAGATGCCGAGTCTGCCT
TGGGGTCAGTGAAAACGTGGTAAACATTTTCGAGGCAAAACAAGACCTGCTGGTTTCAATAGCACAAGTGATCTCTGAAT
GCACGGACTGTGACATTAAAGAAGGGGACGATCTGTCGGAGTTAATTTGTGCATCCTGTTTGGAGGATGCCCAGAGTGCA
TTCGATATCATCAGAAAATACGAGCGCAGCTACATCACCTTTTGTGAGGCATACGAAGCGGTACTTGAAGAGGATTCCCT
AGAAGGAGAGGTGTACACAATATCGGACAGCGACAGTGGGACGTCGTCGCACGATACCAATGGAAACCAAAAGTACATAA
ATGCCGATGAAATCTATGAGATATCAGAAGATGAATGTGATCAAACCGTAGATGCAAAGGGAGAAGACTTCAATAATAGC
GTCGACGATAGTGTTCATTCGAAGAATCAGCAACATGATGAAAAGGAACCCAAAGAAAGTGGTACATTGGACAAGGATGT
CCAGGACGCCCCCCGAAATGAAAGTGTTGCACCTGATCATCAGCAAGGTGAGACTGACACCGAAATTGGCTTTGGACGGC
AGTGAATGTGTTCGGAGCGGTGCTCGGATGGCCTACAAGTGCTCCCACTGCAGTAAGTCCTTTCCACATCGATCCAGGTT
CGAGGAGCACAACCGCGTCCACACGGGAGAACGACCATTCAAATGCCCCAGCTGCCCGATGACCTTCCGACTGAAATCCT
TTCTTAAAAGGCACAGCGCCCTGCATTTGGAAGAACGACCTTACCCGTGCGACATCTGTGCCAAGACTTTTGCTGACAAA
AGTAACCTGCGCCAGCGCAAGAAGACACACTCCGACATTCGACCCTTCGACTGCCCTTCCTGTCTGAGTTCCTTCCGATT
GAAAAGCCACCTGGACCGCCACACCATGAGTCACACGGGCGAGCGGCCATTTAAGTGTGATCACTGCGGTAAAGACTTCA
CGCTACGCTGTAACCTCGTCAAGCATTTAAGGACCCACACCAGGGAACGTCCCTTCAAATGCTCAATATGAAAATCGGCC
TTTACGAACTTATCGAGCCCCATTGCATGAACCATCGAATGAACTACCTTTCCAGTGTGATCGGTGCGACAAGCGGTTTG
TGGATAGGGTTCGTCCTGACTGCCAGTCCCGTTTCTCGACGTCATCCGACCTCCACCAGCCCGGACTGGTACACAAGGCA
AAAGCAAAGATACTAGAATAATTCTAGTGTCTTTGGCAAAAGGACCTTTTACGTGAAGTGTGAGGGTTGCGGTTTAGTCC
TTAAGAATATGATTCTTCTTCGAAGGCATGCTAAGAATTACGGCAAGGCGTTAAAAATGTAATCTTATCTTAGCCAAATA
CGTACCAAATACGTATTTATTATAATTTTGTTATTTTTCATTCAAGAAACGTTTTCAAGCTCGATAACAGTTCGGTAACG
TAACATACATATTCTTTTGCGCCTAACAGCCCACTGTTGTGGGAACAGGGTGATCATTCCACTAGCAAACTGAATGCTAT
GCCAAAATGGTAAACAAACTATTCCCTATAATAAATAAACCGTCTCATTTAATTTGAAAATAAAAAAAAAAAAAAAA
      Library Information (1)
      Library: IP_cDNA
      Description

      Clones isolated by an inverse-PCR screen (SLIP) using a mixture of the GH, LD, LP, and SD cDNA libraries.

      Sample preparation

      Adult heads were collected from an isogenic y; cn bw sp (iso-1) strain.

      Protocol

      These clones have been isolated a directed screening process called SLIP (Self-Ligation of Inverse PCR Products). Clones isolated from this screen have been PCR-amplified using a mixture of 4 different plasmid cDNA libraries as template. These include the GH, LD, LP, and SD cDNA libraries.

      (FlyBase Curators, 2016-)
      Comment
      Reported As
      Symbol Synonyms
      IP
      IP_cDNA
      References (1)
      FlyBase analysis (1)
      FlyBase Curators, 2016-, Curation of large dataset metadata by FlyBase.
      Curation of large dataset metadata by FlyBase. [FBrf0232540]
      External Crossreferences and Linkouts ( 1 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)