Attacin, Att, DIM 16
Please see the JBrowse view of Dmel\AttC for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Mutation in sequenced strain: deletion; 8-bp deletion within coding region.
Gene model reviewed during 5.49
There is only one protein coding transcript and one polypeptide associated with this gene
Small AttC-derived peptides identified by nano LC-MS/MS: pQVLGGSLTSNPSGGADA, pQVLGGSLTSNPSGGADAR, WTSGPFKGQTDLGANLGLSH, pQVLGGSLTSNPSGGADARLDLS.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\AttC using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\AttC in JBrowse2-68
2-72.1
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Identified as a gene with significant level of mRNA cycling as assessed by expression analysis using high density oligonucleotide arrays with probe generated from adult heads harvested over six time points over the course of a day. Shows alteration in expression in a Clk mutant background.
Identification: Encodes a protein that is induced by immune challenge.
Source for merge of: AttC CG4740
Source for merge of AttC CG4740 was sequence comparison ( date:010102 ).
Source for identity of AttC DIM-16 was sequence comparison ( date:031215 ).
Source for identity of: AttC DIM-16