Please see the JBrowse view of Dmel\koko for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Gene model reviewed during 5.54
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\koko using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\koko in JBrowse3-63
3-62.5
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
koko mutants have a reduced rate of stem cell division and show defects in wing, thorax, eye and ovary development.
Source for merge of: CG7682 CG7683
Annotation CG31232 split into CG44009 and CG44010 (corresponding to koko) in release 5.47 of the genome annotation; split supported by cDNA data.
Annotations CG7682, CG7683 merged as CG31232 in release 3 of the genome annotation.
"sprd" may correspond to "CG44009" or "Vha100-2" or both; the P{PZ}sprd05284 insertion maps within "CG44009" and "Vha100-2".
Source for identity of: koko CG31232