FB2024_03 , released June 25, 2024
Human Disease Model Report: epilepsy, SLC12A5-related
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General Information
Name
epilepsy, SLC12A5-related
FlyBase ID
FBhh0000296
Disease Ontology Term
Parent Disease
OMIM
Overview

This report describes a fly model of epilepsies that are SLC12A5-related. The human gene implicated in these diseases is SLC12A5, which encodes an integral membrane potassium-chloride transporter. SLC12A5 is implicated in two forms of epilepsy; see MIM:616645 and MIM:616685. There is a single fly ortholog, Dmel\kcc, for which classical loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated. Dmel\kcc is also orthologous to other potassium-chloride cotransporter genes in human (SLC12A4, SLC12A6, and SLC12A7); only SLC12A5 is implicated in epilepsy in humans.

A UAS construct driving the wild-type human gene, Hsap\SLC12A5, has been introduced into flies. Heterologous rescue (functional complementation) of the seizure phenotype of a hypomorphic allele of Dmel\kcc has been observed.

Reduced function of kcc results in seizure sensitivity, including a lowered threshold to evoked electrophysiologically recorded seizure-like activity and "bang-sensitive" phenotypes. Seizure sensitivity is observed in animals with kcc loss-of-function effected by targeted RNAi in either glia or neurons. Amorphic alleles of kcc are lethal. Genetic and physical interactions have been described; see below and in the gene report for kcc.

[updated June 2016 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: epilepsy, SLC12A5-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype

(Note: The following description is for one of the two forms of epilepsy for which SLC12A5 is implicated as a causative gene.)

Early infantile epileptic encephalopathy-34 (EIEE34) is an autosomal recessive severe neurologic disorder characterized by onset of refractory migrating focal seizures in infancy. Affected children show developmental regression and are severely impaired globally (summary by Stodberg et al., 2015; pubmed:26333769). [from MIM:616645; 2016.06.03]

Genetics

EIEE34 is inherited as an autosomal recessive; EIG14 (classified as a susceptibility locus) exhibits autosomal dominant inheritance with incomplete penetrance. [from MIM:616645; MIM:616685; 2016.06.03]

Cellular phenotype and pathology
Molecular information

The protein encoded by SLC12A5 is an integral membrane K-Cl cotransporter that can function in either a net efflux or influx pathway, depending on the chemical concentration gradients of potassium and chloride. The encoded protein can act as a homomultimer, or as a heteromultimer with other K-Cl cotransporters, to maintain chloride homeostasis in neurons. [from Gene Cards, SLC12A5; 2016.06.03]

External links
Disease synonyms
seizure sensitivity
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 4 human to 1 Drosophila; the fly gene kcc is orthologous to SLC12A4, SLC12A5, SLC12A6, and SLC12A7 in human.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    kazachoc (kcc) encodes a potassium:chloride symporter that contributes to seizure susceptibility. [Date last reviewed: 2019-09-12]
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of human gene SLC12A4; moderate-scoring ortholog of SLC12A5, SLC12A6, SLC12A7 (1 Drosophila to 4 human). Dmel\kcc shares 51-57% identity and 68-74% similarity with the human genes.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (1 groups)
      protein-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, peptide massfingerprinting
      Alleles Reported to Model Human Disease (Disease Ontology) (5 alleles)
      Models Based on Experimental Evidence ( 3 )
      Modifiers Based on Experimental Evidence ( 2 )
      Allele
      Disease
      Interaction
      References
      Models Based on Experimental Evidence ( 0 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 1 )
      Allele
      Disease
      Interaction
      References
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      Delta2-3 transposase
      amorphic allele - molecular evidence
      ethyl methanesulfonate
      References (14)