FB2024_03 , released June 25, 2024
Human Disease Model Report: autism spectrum disorder, susceptibility to, NBEA-related
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General Information
Name
autism spectrum disorder, susceptibility to, NBEA-related
FlyBase ID
FBhh0000518
OMIM
Overview

The human Neurobeachin gene (NBEA) has been identified as a candidate susceptibility locus for autism spectrum disorder (rated in SFARI as high confidence). NBEA encodes an anchor protein that binds to the regulatory subunit of protein kinase A (PKA), confining it to specific subcellular sites. There is a single orthologous gene in Drosophila, rg, for which classical amorphic and loss-of-function alleles, RNAi targeting constructs, and alleles caused by insertional mutagenesis have been generated. Dmel\rg is also orthologous to a second human gene, LRBA.

The human NBEA gene has not been introduced into flies. The orthologous mouse gene, Mmus\Nbea, has been introduced into flies; partial functional complementation of rg learning and neural phenotypes is observed.

Animals homozygous for amorphic or hypomorphic alleles of rg are viable and fertile, with a rough eye phenotype; they exhibit learning defects, defective social interactions, impaired habituation, aberrant locomotion, and hyperactivity; neuroanatomy defects are observed in both larvae and adults.

[updated Apr. 2022 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: autism spectrum disorder, susceptibility to
Symptoms and phenotype

Autism, the prototypic pervasive developmental disorder (PDD), is usually apparent by 3 years of age. It is characterized by a triad of limited or absent verbal communication, a lack of reciprocal social interaction or responsiveness, and restricted, stereotypic, and ritualized patterns of interests and behavior (Bailey et al., 1996, pubmed:8655659; Risch et al., 1999, pubmed:10417292). 'Autism spectrum disorder,' sometimes referred to as ASD, is a broader phenotype encompassing the less severe disorders Asperger syndrome (MIM:608638) and pervasive developmental disorder, not otherwise specified (PDD-NOS). 'Broad autism phenotype' includes individuals with some symptoms of autism, but who do not meet the full criteria for autism or other disorders. Mental retardation coexists in approximately two-thirds of individuals with ASD, except for Asperger syndrome, in which mental retardation is conspicuously absent (Jones et al., 2008; pubmed:18698615). [from MIM:209850; 2017.03.18]

Specific Disease Summary: autism spectrum disorder, susceptibility to, NBEA-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics

The SFARI Gene autism database ( https:gene.sfari.org ) rates the gene-autism association for NBEA as high confidence (score 1). [2020.11.05]

The SFARI Gene autism database ( https:gene.sfari.org ) rates the gene-autism association for LRBA as suggestive evidence (score 3). [2020.11.05]

Cellular phenotype and pathology
Molecular information

Neurobeachin (NBEA) encodes a member of a large, diverse group of A-kinase anchor proteins that target the activity of protein kinase A to specific subcellular sites by binding to its type II regulatory subunits. [Gene Cards, NBEA; 2017.03.18]

External links
Disease synonyms
autism spectrum disorder, susceptibility to (postulated), NBEA-related
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    Symbol / Name
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    Many to one (2 human to 1 Drosophila); the human genes are NBEA and LRBA.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      rugose (rg) encodes a protein involved in synaptic architecture, brain morphology and associative learning. [Date last reviewed: 2019-09-26]
      Gene Groups / Pathways
        Comments on ortholog(s)

        Moderate- to high-scoring ortholog of human NBEA and LRBA (1 Drosophila to 2 human). Dmel\rg shares 39% identity and 54% similarity with human NBEA.

        Orthologs and Alignments from DRSC
        DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
        Other Genes Used: Viral, Bacterial, Synthetic (0)
          Summary of Physical Interactions (1 groups)
          RNA-protein
          Interacting group
          Assay
          References
          anti bait coimmunoprecipitation, quantitative reverse transcription pcr
          Alleles Reported to Model Human Disease (Disease Ontology) (5 alleles)
          Models Based on Experimental Evidence ( 4 )
          Modifiers Based on Experimental Evidence ( 1 )
          Allele
          Disease
          Interaction
          References
          Alleles Representing Disease-Implicated Variants
          Genetic Tools, Stocks and Reagents
          Sources of Stocks
          Contact lab of origin for a reagent not available from a public stock center.
          Bloomington Stock Center Disease Page
          Related mammalian, viral, bacterial, or synthetic transgenes
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila transgenes
          Allele
          Transgene
          Publicly Available Stocks
          RNAi constructs available
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila classical alleles
          Allele
          Allele class
          Mutagen
          Publicly Available Stocks
          loss of function allele
          Delta2-3 transposase
          Delta2-3 transposase
          loss of function allele
          Delta2-3 transposase
          Delta2-3 transposase
          gamma ray
          loss of function allele
          gamma ray
          gamma ray
          loss of function allele
          gamma ray
          loss of function allele
          gamma ray
          amorphic allele - molecular evidence
          FLPase
          References (9)