FB2024_04 , released June 25, 2024
Human Disease Model Report: Ehlers-Danlos syndrome, spondylodysplastic type 3
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General Information
Name
Ehlers-Danlos syndrome, spondylodysplastic type 3
FlyBase ID
FBhh0000871
Overview

This report describes Ehlers-Danlos syndrome, spondylodysplastic type 3 (EDSSPD3); EDSSPD3 exhibits autosomal recessive inheritance. The human gene implicated in this disease is solute carrier family 39 member 13 (SLC39A13), which encodes a transmembrane protein that is postulated to function as a zinc transporter. There is a single orthologous gene in Drosophila, Zip99C, for which RNAi targeting constructs and alleles caused by insertional mutagenesis have been generated.

A UAS construct of the wild-type human Hsap\SLC39A13 gene has been introduced into flies; partial heterologous rescue (functional complementation) has been demonstrated.

Ubiquitous knockdown of Dmel\Zip99C effected by RNAi results developmental arrest in the pupal stage that can be rescued by iron supplementation, but not zinc. This work in flies supports the function of Zip99C as an iron transporter and suggests that impaired iron transport may play a role in this form of Ehlers-Danlos syndrome.

[updated Aug. 2018 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: Ehlers-Danlos syndrome
Symptoms and phenotype

Ehlers-Danlos syndrome is a group of disorders that affect connective tissues supporting the skin, bones, blood vessels, and many other organs and tissues. Defects in connective tissues cause the signs and symptoms of these conditions, which range from mildly loose joints to life-threatening complications. [Genetics Home Reference, Ehlers-Danlos syndrome; 2020.08.25]

The Ehlers-Danlos syndromes (EDS) are a group of heritable connective tissue disorders that share the common features of skin hyperextensibility, articular hypermobility, and tissue fragility. The main features of classic Ehlers-Danlos syndrome are loose-jointedness and fragile, easily bruised skin that heals with peculiar 'cigarette-paper' scars (Beighton, 1993). The current OMIM classification of Ehlers-Danlos syndromes is based on a 2017 international classification described by Malfait et al., 2017; pubmed:28306229), which recognizes 13 EDS subtypes. [from MIM:130000; 2020.08.25]

Specific Disease Summary: Ehlers-Danlos syndrome, spondylodysplastic type 3
OMIM report

[EHLERS-DANLOS SYNDROME, SPONDYLODYSPLASTIC TYPE, 3; EDSSPD3](https://omim.org/entry/612350)

Human gene(s) implicated

[SOLUTE CARRIER FAMILY 39 (ZINC TRANSPORTER), MEMBER 13; SLC39A13](https://omim.org/entry/608735)

Symptoms and phenotype

The classic phenotypes of Ehlers-Danlos syndrome include joint laxity, skin hyperextensibility, and poor wound healing. [from MIM:130070; 2018.08.16]

Ehlers-Danlos syndrome spondylodysplastic type 3 is characterized by short stature, hyperelastic skin and hypermobile joints, protuberant eyes with bluish sclerae, finely wrinkled palms, and characteristic radiologic features (Giunta et al., 2008; pubmed:18513683). [from MIM:612350; 2018.08.16]

Genetics

Ehlers-Danlos syndrome spondylodysplastic type 3 (EDSSPD3) is caused by homozygous mutation in the SLC39A13 gene. [from MIM:612350; 2018.08.16]

Cellular phenotype and pathology
Molecular information

SLC39A13 which encodes a transmembrane protein that functions as a zinc transporter. [Gene Cards, SLC39A13; 2018.08.16]

SLC39A13 belongs to a subfamily of proteins that show structural characteristics of zinc transporters (Taylor and Nicholson, 2003; pubmed:12659941). [from MIM:608735; 2018.08.16]

For this disease (EDSSPD3), an increased lysyl pyridinoline/hydroxylysyl pyridinoline (LP/HP) ratio, indicating underhydroxylation of collagen, is observed in tested patients. [from MIM:612350; 2018.08.16]

External links
Disease synonyms
EDSSPD3
EDS-SPD3
Ehlers-Danlos syndrome, spondylodysplastic type, 3
SCD-EDS
spondylocheirodysplasia, Ehlers-Danlos syndrome-like
spondylocheiro dysplastic form of Ehlers-Danlos syndrome
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

One to one: 1 human to 1 Drosophila.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    Zinc/iron regulated transporter-related protein 99C (Zip99C) encodes an iron transporter located on the Golgi and endoplasmic reticulum that moves iron from the cytoplasm into the secretory compartments. [Date last reviewed: 2019-03-21]
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of human SLC39A13 (1 Drosophila to 1 human). Dmel\Zip99C shares 46% identity and 60% similarity with the human gene.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (0 groups)
      Alleles Reported to Model Human Disease (Disease Ontology) (1 alleles)
      Models Based on Experimental Evidence ( 0 )
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      Modifiers Based on Experimental Evidence ( 1 )
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      Genetic Tools, Stocks and Reagents
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      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
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      References (8)