FB2024_03 , released June 25, 2024
Human Disease Model Report: neurodegeneration, childhood-onset, with brain atrophy
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General Information
Name
neurodegeneration, childhood-onset, with brain atrophy
FlyBase ID
FBhh0000958
Disease Ontology Term
Parent Disease
Overview

This report describes childhood-onset neurodegeneration with brain atrophy (CONDBA); CONDBA exhibits autosomal dominant inheritance. The human gene implicated in this disease is UBTF, an HMG-box DNA-binding transcription factor that primarily regulates ribosomal RNA transcription. No gene orthologous to UBTF has been identified in Drosophila.

Multiple UAS constructs of the human Hsap\UBTF gene have been introduced into flies, including wild-type and a variant implicated in the human disease (using the UBTF1 isoform). Variant(s) implicated in human disease tested (as transgenic human gene, UBTF): the E210K variant form has been introduced into flies.

Experiments in flies confirm the pathogenicity of the E210K variant form. Pan-neuronal expression of the wild-type Hsap\UBTF does not reduce survival to adulthood, but pan-neuronal expression of the E210K variant form results in complete lethality prior to adulthood. Eye-specific expression of the wild-type results in eye defects and semi-lethality. Eye-specific expression of the E210K variant is much more dramatic: lethality at the pupal stage is observed; the heads are undeveloped and missing inside the pupal case.

[updated Jan. 2019 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: neurodegeneration, childhood-onset, with brain atrophy
OMIM report

[NEURODEGENERATION, CHILDHOOD-ONSET, WITH BRAIN ATROPHY; CONDBA](https://omim.org/entry/617672)

Human gene(s) implicated

[UPSTREAM BINDING TRANSCRIPTION FACTOR (RNA POLYMERASE I); UBTF](https://omim.org/entry/600673)

Symptoms and phenotype

CONDBA is a severe progressive neurodegenerative disorder characterized by loss of motor and cognitive skills between ages 2 and 7 years. Affected individuals may have normal development or mild developmental delay, but all eventually lose all motor skills, resulting in inability to walk, absence of language, and profound intellectual disability (summary by Edvardson et al., 2017; pubmed:28777933). [from MIM:617672; 2019.01.15]

Genetics

Childhood-onset neurodegeneration with brain atrophy (CONDBA) is caused by heterozygous mutation in the UBTF gene. [from MIM:617672; 2019.01.15]

Cellular phenotype and pathology

Brain imaging shows progressive cerebral and cerebellar atrophy (summary by Edvardson et al., 2017; pubmed:28777933). [from MIM:617672; 2019.01.15]

Molecular information

Upstream binding factor (UBF or UBTF) is a transcription factor required for expression of the 18S, 5.8S, and 28S ribosomal RNAs, and components of the SL1 complex (TBP and multiple TBP-associated factors). [from MIM:600673; 2019.01.15]

UBTF encodes a member of the HMG-box DNA-binding protein family. The UBTF protein recognizes the ribosomal RNA gene promoter and activates transcription mediated by RNA polymerase I through cooperative interactions with the transcription factor SL1/TIF-IB complex; it binds specifically to the upstream control element. The UBTF protein may also play important roles in chromatin remodeling and pre-rRNA processing; its activity is regulated by both phosphorylation and acetylation. [Gene Cards, UBTF; 2019.01.15]

The 2 isoforms of UBTF appear to play different transcriptional regulatory roles: UBTF1 regulates ribosomal RNA transcription by RNA polymerase 1 (Pol I); UBTF2 regulates mRNA transcription by RNA polymerase 2 (Pol II) (FBrf0238028 and references cited therein).

External links
Disease synonyms
childhood-onset neurodegeneration with brain atrophy
CONDBA
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

No gene orthologous to UBTF has been identified in Drosophila; a number of genes exhibit similarity within an HMG-box domain.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (0)
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (0 groups)
      Alleles Reported to Model Human Disease (Disease Ontology) (2 alleles)
      Models Based on Experimental Evidence ( 2 )
      Modifiers Based on Experimental Evidence ( 0 )
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      Alleles Representing Disease-Implicated Variants
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      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
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      Selected Drosophila classical alleles
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      References (5)