FB2024_04 , released June 25, 2024
Human Disease Model Report: DYRK1A-related intellectual disability syndrome
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General Information
Name
DYRK1A-related intellectual disability syndrome
FlyBase ID
FBhh0001224
Overview

This report describes DYRK1A-related intellectual disability syndrome, which exhibits autosomal dominant inheritance. This disease is also described as a syndromic form of autosomal dominant intellectual disability. The human DYRK1A gene (dual specificity tyrosine phosphorylation regulated kinase 1A) plays a significant role in signaling pathways regulating cell proliferation and brain development. Deviation from diploidy for DYRK1A appears to be deleterious in either direction: the gene is located on chromosome 21 and is postulated to play a key role in the development of Down syndrome (see FBhh0001056).

There is a single high-scoring ortholog of DYRK1A in Drosophila, mnb, for which classical loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated. Dmel\mnb, is also orthologous to a second human gene, DYRK1B.

The human DYRK1A gene has not been introduced into flies. A human frameshift/termination variant newly implicated in this disease has been investigated in flies, using the orthologous Drosophila gene. Variant(s) implicated in human disease tested (as analogous mutation in fly gene): D401X in the fly mnb gene [corresponds to E396X (E358X, E387X) in the human DYRK1A gene].

As is the case for the human gene, the precise level of Dmel\mnb expression and function appears to be important. Animals homozygous for loss-of-function mutations of mnb exhibit an extended developmental time course, defects in olfactory and visual behavior, neuroanatomy defects, and neurophysiology defects. Pan-neuronal overexpression of mnb causes age-dependent degeneration of brain neurons, accelerated age-dependent decline in motor performance, shortened lifespan, modified presynaptic structures and enhanced spontaneous transmitter release, and slowed recovery from short-term depression of synaptic transmission. Physical and genetic interactions have been described for Dmel\mnb; see below and in the mnb gene report.

[updated Apr. 2023 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: intellectual disability, autosomal dominant
Symptoms and phenotype

Intellectual disability is characterized by impairments in intellectual functioning and adaptive behavior; symptoms must be present before a child becomes 18 years old (http://medical-dictionary.thefreedictionary.com/mental+retardation; 2016.01.19).

Intellectual disability can be subdivided into syndromic forms, characterized by cognitive impairment accompanied by dysmorphic features, malformations or neurological abnormalities, and nonsyndromic forms, characterized by cognitive impairment without additional features (Basel-Vanagaite, 2008; DOI: 10.1002/9780470015902.a0021454).

Specific Disease Summary: DYRK1A-related intellectual disability syndrome
OMIM report

[INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 7; MRD7](https://omim.org/entry/614104)

Human gene(s) implicated

[DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 1A; DYRK1A](https://omim.org/entry/600855)

Symptoms and phenotype

A syndromic form of severe intellectual disability that may include microcephaly, facial dysmorphic features, seizures, and other neurodevelopmental anomalies. [from MIM:614104; 2020.07.20]

DYRK1A-related intellectual disability syndrome is characterized by intellectual disability including impaired speech development, autism spectrum disorder including anxious and/or stereotypic behavior problems, and microcephaly. Affected individuals often have a clinically recognizable phenotype including a typical facial gestalt, feeding problems, seizures, hypertonia, gait disturbances, and foot anomalies. [Gene Reviews, DYRK1A-related Intellectual Disability Syndrome; 2020.07.20]

Of 14 individuals assessed, all shared characteristics of congenital microcephaly at birth, intellectual disability, developmental delay, severe speech impairment, short stature, and distinct facial features (Ji, et al., 2015; pubmed:25944381).

Genetics

Of 14 individuals with de novo heterozygous variants of DYRK1A, five had microdeletions, three had small insertions or deletions (INDELs) and six had deleterious SNVs (Ji, et al., 2015; pubmed:25944381).

This disease is caused by heterozygous disruption of the DYRK1A gene. [from MIM:614104; 2020.07.20]

Cellular phenotype and pathology
Molecular information

DYRK1A encodes a member of the Dual-specificity tyrosine phosphorylation-regulated kinase (DYRK) family. This member contains a nuclear targeting signal sequence, a protein kinase domain, a leucine zipper motif, and a highly conservative 13-consecutive-histidine repeat; it catalyzes its autophosphorylation on serine/threonine and tyrosine residues. DYRK1A appears to play a significant role in a signaling pathway regulating cell proliferation and in brain development. [Gene Cards, DYRK1A; 2019.06.25]

External links
Disease synonyms
autosomal dominant intellectual developmental disorder 7
autosomal dominant syndromic intellectual disability with microcephaly
DYRK1A haploinsufficiency syndrome
DYRK1A-related intellectual disability syndrome
DYRK1A syndrome
intellectual developmental disorder, autosomal dominant 7
mental retardation, autosomal dominant 7
MRD7
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    Many to one: 2 human to 1 Drosophila; the second human gene is DYRK1B.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      minibrain (mnb) encodes a Ser/Thr protein kinase of the DYRK subfamily. It interacts with several signaling pathways and it is involved in behavior, cell cycle, cytoskeleton dynamics, neural proliferation, neurogenesis, neuronal differentiation, synaptic plasticity, and tissue growth. [Date last reviewed: 2019-03-14]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      Moderate- to high-scoring ortholog of human DYRK1A and DYRK1B (1 Drosophila to 2 human). Dmel\mnb shares 48% identity and 58% similarity with DYRK1A; DYRK1B encodes a shorter protein with 59% identity and 69% similarity with mnb.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (9 groups)
        protein-protein
        Interacting group
        Assay
        References
        enzymatic study, western blot, autoradiography
        anti tag coimmunoprecipitation, anti tag western blot, Identification by mass spectrometry
        anti tag coimmunoprecipitation, western blot
        experimental knowledge based
        anti tag coimmunoprecipitation, anti tag western blot, enzymatic study, western blot, autoradiography
        anti tag coimmunoprecipitation, western blot, enzymatic study, peptide massfingerprinting
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot, experimental knowledge based, anti tag western blot
        enzymatic study, autoradiography, anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
        Alleles Reported to Model Human Disease (Disease Ontology) (5 alleles)
        Models Based on Experimental Evidence ( 2 )
        Modifiers Based on Experimental Evidence ( 3 )
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        References (5)