FB2024_03 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000095187
Interaction Network
Interactions Browser links
Lar network
Abl network
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0108074-1.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Lar 

Dlar

bait

GST tag

Lar 
Abl 

Abl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Lar 
PTP domains
sufficient binding region
aa 1452-2030
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey derived from S2 cell extract.

Endogenous Abl binds specifically to Lar, but not to other protein tyrosine phosphatases tested, Ptp69D and Ptp10D.

FBrf0108074-10.ENZ.A
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Lar 

Dlar

enzyme

GST tag

Lar 

Dlar

enzyme

GST tag

Lar 
Lar 
Abl 

Abl

enzyme target

His tag, [32]P label

Abl 

Abl

enzyme target

His tag, [32]P label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0108074-2.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Lar 

Dlar

bait

GST tag

Lar 
Lar 
Abl 

Abl

prey

His tag, [32]P label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Lar 
PTP domain 2
sufficient binding region
aa 1738-2030

no binding to PTP domain 1

Lar 
catalytic residues
mutation increasing interaction

Cys-to-Ser mutations that inactivate PTP domains

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in baculovirus system.

Purified Abl was allowed to autophosphorylate in the presence of labelled γ[32]P-ATP before testing for binding to Lar.

FBrf0108074-3.ENZ.A
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Abl 

Abl

enzyme

His tag

Abl 

Abl

enzyme

His tag

Lar 

Dlar

enzyme target

GST tag, [32]P label

Lar 

Dlar

enzyme target

GST tag, [32]P label

Lar 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0215568-12.SPR
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Lar 

DLAR

bait

His tag

Lar 
Lar 
Abl 

Abelson peptide

prey

phosphopeptide

Abl 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Lar 
D1 PTP domain
unspecified role
aa 1496-1731
Lar 
D2 PTP domain
unspecified role
aa 1760-2022
Abl 
phosphotyrosine region
unspecified role
aa 536-545

RDDTpYTAHAG

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Enzyme expressed and purified from bacteria.

Enzyme target derived from chemical synthesis.

Each of the D1 and D2 PTP domains can bind phosphopeptides independently, but with slightly different sequence specificities..

FBrf0215568-4.ENZ
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
Lar 

DLAR

enzyme

His tag

Lar 

DLAR

enzyme

His tag

Lar 
Abl 

Abelson peptide

enzyme target

phosphopeptide

Abl 

Abelson peptide

enzyme target

phosphopeptide

Abl 
Abl 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (2)