FB2024_03 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000095804
Interaction Network
Interactions Browser links
HP1c network
His3 network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0206169-10.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
HP1c 

HP1c

bait

GST tag

His3 

H3

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait expressed and purified from bacteria.

Prey endogenous to cells and purified as mononucleosomes.

HP1c-bound His3 is enriched for K9 trimethylation.

FBrf0206169-5.FW.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
HP1c 

HP1c

bait

His tag

His3 

H3

prey
His3 
His3 
His3 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
His3 
N-terminal tail
necessary binding region

trypsin removal of N-terminal tail abolishes interaction

His3 
N-terminal tail
sufficient binding region

N-terminal tail peptide

His3 
H3K9me3
necessary binding region
aa 9

interaction requires Lysine 9 methylation

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait expressed and purified from bacteria.

Prey endogenous to cells and purified as total nucleosomes.

HP1c binds His3 purified from S2 cells, but not recombinant His3.

A His3 N-terminal peptide bearing K9 trimethylation, but not unmodified peptide, competes with endogenous His3 for binding to HP1c.

Purified HP1c was fractionated by PAGE, transferred to membrane, and tested for its ability to bind endogenous His3. Binding was assayed using anti-His3 antibodies.

FBrf0206169-8.FW.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
His3 

H3

bait
HP1c 

HP1c

prey

GST tag

HP1c 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
HP1c 
chromodomain
necessary binding region
aa 1-62

necessary and sufficient

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait endogenous to cells and purified as nucleosomes.

Prey expressed and purified from bacteria.

Purified His3 was fractionated by PAGE, transferred to membrane, and tested for its ability to bind HP1c.

FBrf0212000-23.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
His3 

His3

bait

biotinylated

HP1c 

HP1c

prey

FLAG tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; recombinant proteins produced in baculovirus and insect cell system.

Interaction detected with H3K9me2 and H3K9me3 not with H3K4me2 or H3K36me3

FBrf0241416-16.PD.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
His3 

H3

bait

biotin label

HP1c 

HP1c

prey

FLAG or GST tag

HP1c 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
HP1c 
chromodomain residue 10
mutation disrupting interaction
aa 10

V10M

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait peptide chemically synthesized and labeled in vitro; prey produced as a recombinant fusion protein in baculovirus and Sf21 cell system.

FBrf0241416-19.FPS
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
HP1c 

HP1c

bait
HP1c 
His3 

H3

prey

fluorescein label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
HP1c 
chromodomain
sufficient binding region
unspecified
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

For HP1c-His3K9me3, Kd = 5.6uM

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial or baculoviral system; prey peptide chemically synthesized and labeled in vitro.

External Crossreferences and Linkouts ( 0 )
References (3)