FB2024_03 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000097344
Interaction Network
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drpr network
Shark network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0205492-1.Y2H
Description
physical association
Assay
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Shark

bait

fused to LexA DNA-binding domain

drpr 

Drpr

prey

fused to B42 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
regulatory region
sufficient binding region
aa 10–468
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast LexA-BD/B42-AD

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from embryo cDNA expression library).

FBrf0205492-2.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Shark

bait

fused to LexA DNA-binding domain

drpr 

Drpr

prey

fused to B42 activation domain

drpr 
drpr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
regulatory region
sufficient binding region
aa 10–468
drpr 
tyrosine phosphorylation site
mutation disrupting interaction
aa 949

Y949F

drpr 
tyrosine phosphorylation site
mutation decreasing interaction
aa 934

Y934F

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast LexA-BD/B42-AD

Yeast cells also expressed constitutively active c-Src kinase domain, which was necessary for detection of the interaction.

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

The requirement for activated Src kinase suggests that drpr must be phosphorylated to bind shark.

FBrf0205492-3.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
drpr 

Draper

bait

HA tag

drpr 

Shark

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
drpr 
tyrosine phosphorylation site
mutation disrupting interaction
aa 949

Y949F

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0205492-4.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
drpr 

Draper

bait

HA tag

Shark

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Antibody to drpr protein (not the HA tag) used for immunoprecipitation.

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0218175-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
drpr 

drpr

bait

HA tag

Shark

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

Both drpr isoforms tested, I and II, bind.

FBrf0234689-2.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
drpr 

Draper

bait

HA tag

drpr 

Shark

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
drpr 
residue Y949
mutation disrupting interaction
aa 949

Y949F, coordinates relative to drpr-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0240583-1.FRET.FT
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Shark

fluorescence donor

BG505 tag

Shark

fluorescence donor

BG505 tag

Shark

fluorescence donor

BG505 tag

drpr 

Draper

fluorescence acceptor

protein inserted into rhodamine labeled liposome

drpr 
drpr 

Draper

fluorescence acceptor

protein inserted into rhodamine labeled liposome

drpr 

Draper

fluorescence acceptor

protein inserted into rhodamine labeled liposome

drpr 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
drpr 
ITAM domain residues 934,949
mutation disrupting interaction
aa 934,949

Y934F,Y949F, coordinates relative to drpr-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Shark and Src42A were inserted into rhodamine labeled liposomes and BG505 tagged Shark was added. A Shark-drpr interaction was inferred from quenching of Shark\'s donor fluorescence upon addition of ATP, presumably due to Shark binding to phosphorylated drpr bringing it into proximity with the rhodamine labeled liposome.

Interaction in vitro; fluorescence donor produced as a recombinant fusion protein in bacterial system; fluorescence acceptor produced as a recombinant fusion protein in bacterial system.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (4)