>From dnelson@XXXX Mon Apr 10  14:53:50  2000
...
I have been teaching a bioinformatics course here at UT and one task we took
on as a course was the discovery and assembly of all the mitochondrial
carriers in Drosophila.  We found 44, and there is a report in Genbank of
another very distant member, but it is very weak.  I sent this information
to Marian and Mark Adams, but it was not updated in the paper, which claims
only 38 mitochondrial carriers.  I attach these sequences for you.
...
[Note the correspondence between these and CG's was established by
MA April 15 2000 by matches with aa_gadfly.dros0321]
===============================================================================
March 7, 2000
This is the completed Drosophila mitochondrial carrier set. There are 44 mito carriers in 
Drosophila.  The mito carrier motif is P(hyd)(E,D)(hyd)(hyd)(K,R)X(K,R)(hyd)Q 
where (hyd) = a hydrophobic amino acid.  Some variation is allowed as in the second 
motif of seq. 3 below.
Mito carrier motifs in the sequences are underlined.  There should be three,
spaced about 100 amino acids apart.
1. AC014984 comp(11159-11678, 9307-9415, 9050-8759)
two introns ESTs AI107181, AA698455, AI388998, 
AA696852, AA441566 Sun Young Moon
>CG1628|FBan0001628|CT4364|FBan0001628  last_updated:000321 
MHGGGTGNNINFVEGLIDFLAGSLGGAAQVYVSQPLDTVKVKLQTFPEAYRGMLDCFLST
YRKDGVLRGLYAGSVPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAG
SLAACFSTLTLCPTELIKCKLQALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGFYR
GLSSTFLREMPGYFFFFGSYEGTRELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTFPA
DVIKSRIQVKNLNESMFAVGADIVRREGVLALYRGLLPSVLRTIPATATLFVVYEYTKRA
LSATL*
2. AC013977 comp(58168-59166) = AC008140, AC009219, 
AC009984, AC009741 no introns ESTs AI258994, AI258107  
David Nelson
>CG6608|FBan0006608|CT20552|FBan0006608  last_updated:000321 
MAVTTGSTSEATTTTTPVPRRKHSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQV
EPLGKNAAKEGPGALTSKYTSIGQAVKTIYREEGMLAFWKGHNPAQVLSIMYGICQFWTY
EQLSLMAKQTSYLADHQHLSNFLCGAAAGGAAVIISTPLDVIRTRLIAQDTSKGYRNATR
AVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAYRLFSDWACAFLEVSDRSQLPTWTL
LGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHGVWDCLRLTVRQEGVR
GLYKGVAPTLLKSSMTTALYFSIYDKLKQVRF*
3. AC019974 comp(31626-32546) = AC009392 no introns
ESTs AI513226, AI258372, AI135368, AI106672, AI514125,
AA803450, AI064545, AI405779, AI388401, AI133912,
AI063819, AI106827, AI064563, AI135996, AI108894, 
AI107113   David Nelson 
colt gene Y12495 = AC019974, AC009392
Hartenstein,K., Sinha,P., Mishra,A., Schenkel,H., Torok,I. and
Mechler,B.M.
The congested-like tracheae gene of Drosophila melanogaster encodes
a member of the mitochondrial carrier family required for
gas-filling of the tracheal system and expansion of the wings after
eclosion
Genetics 147 (4), 1755-1768 (1997)
MTTTENVSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGT
FDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFV
AGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCA
TMLRDLPANGLYFLVYEALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKS
RLQSAPEGTYKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFN
IVAPNF*
4. AC020113 comp(29610-29643, 29538-29076, 28424-29000)
= AC009849 two introns ESTs AI135358, AI135651, AI404820,
AI513234, AI944743, AI945049  SUN YOUNG MOON
>CG4995|FBan0004995|CT16036|FBan0004995  last_updated:000321 
>CG18626|FBan0018626|CT41430|FBan0018626  last_updated:000321 
MVVDFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPKYKGTFHCFRTIVQRDKFIGLYRG
ISSPMGGIGLVNAIVFGVYGNVQRLSNDPNSLTSHFFAGSIAGVAQGFVCAPMELAKTRL
QLSTQVDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTATILRDIPGDYFVSFEYLMRQVET
PGVAYTLMAGGCAGMSSWLACYPIDVVKTHMQADALGANAKYNGFIDCAMKGFRNEGPQY
FFRGLNSTLIRAFPMNAACFFVVSWVLDICNAKGGMDSVMHSDQPLTLVNLDNKSQADLE
ATAPTVEEVVRKIITDNAMSHQYVSTPKDVVHSHYTSSTINIPKESKARLASDCNLK*
5. AC010580 COMP (45288-45333, 45386-45652, 45716-46131, 
46244-46409) THREE introns = AC017540, AC010579. 
ESTs AA141259, AA141260  Jianning Tao 
>CG4743|FBan0004743|CT15283|FBan0004743  last_updated:000321 
MAAELGLESAAGSVAIKMQEPVNKLKFFHALVAGGVAGMVVDIALFPIDTVKTRLQSELG
FWRAGGFRGIYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAE
VLACLIRVPVEAKQRSQTLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLI
QFPLWEYFKLQWTPLTGFDSTPFSVALCGAVAGGISAGLTTPLDVVKTRIMLAERESLNR
RRSARRILHGIYLERGFSGLFAGFVPRVLWITLGGAFFFGFYDLTTRILGATSTDH*
6. AC013100 20082-20482, 20573-21011 = AC008360 one intron 
Note: this gene is adjacent to AC012807 (2 genes on fragment)
ESTs AI238956, AI404603, AI063021, AA695373, AI404222, AI401861, 
AA141396   Yuan Gao
>CG8790|FBan0008790|CT25340|FBan0008790  last_updated:000321 
MPHQERKSMWFFGGLASVGAAMVTHPLDLIKVTLQTQQGHLSVAQLIPKLAREQGVLVFY
NGLSASVLRQLTYSTARFGVYEAGKKYVNTDSFGGKVALAGASGLVGGIVGTPADMVNVR
MQNDVKLPPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIGQIAFYDQTK
IYLLATPYFQDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNGLWDIVKHTA
KLGPLGFFKGYVPAFVRLGPHTIITFVFLEQLRLKFGTLN*  
7. AC017347 comp(23830-24078, 23632-23768, 22686-23213) 
= AC007588, AC007852  two introns no ESTs  David Nelson 
>CG8323|FBan0008323|CT24577|FBan0008323  last_updated:000321 
MATSDFVLGGLASVGATFFTNPIEVIKTRIQLQGELAARGTYVEPYKGIVNAFITVAKND
GITGLQKGLAPALYFQFIINSFRLSIYSEAMERRWMHNRKGEVSYGMGLLWGAIGGVVGC
YFSSPFFLIKTQLQSQAAKQIAVGYQHAHTSMTDALRQIYSRNGVRGLWRGSVAALPRAA
LGSGAQIATFGKTKALLVQYDLVTQPTLNSFSAGLIAGSIMSVAITPPDVITTRLYNQGV
DAEGRGLLYRGWLDCFVKILRSEGVYGMYKGFWANYLRIAPHSTLVLLFFDELVAVRTKY
SNQ*
8. AC017347 comp(22017-22264, 21802-21937, 21164-21694
= AC007588, AC007852  two introns no ESTs  David Nelson
>CG18327|FBan0018327|CT41605|FBan0018327  last_updated:000321 
MATSDFVLGGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKND
GILGLQKGLAPALCFQFVINSFRLSIYTHAVEKGWVHNNKGEISFAKGMLWGALGGVVGS
YCASPFFLIKTQLQAQAAKQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRAT
VASAVQIAVFGQAKSLLKENGVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYNQGV
DAQGRGIYYRGWLDCVLTILRSEGVYGLYKGFWPIYLRSAPYSTLVLLFFDELIALREKY
DLHY*
9. AC017347 comp(20255-20502, 19249-19788, 19836-19971)
= AC007588, AC007852  two introns 
ESTs AI530949, AI530942, AI259350 first two ESTs have 
retained an intron David Nelson
>CG18324|FBan0018324|CT41583|FBan0018324  last_updated:000321 
MTKSDFVLGGTAAMGAVVFTNPIDVVKTRMQLQGELAARGTYVKPYRHLPQAMLQIVLND
GLLALEKGLAPALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRGMFFGALGGCTGT
YFASPFYMIKAQQHAQAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTL
VASSVQIGTFPKAKSLLKDKGWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPV
DEKGRGLMYKGLVDCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFEKLLHLRDRY
VFSQRRN*
10. AC017377 comp(130619-131276, 130194-130549) one intron 
no ESTs  David Nelson
>CG18340|FBan0018340|CT41647|FBan0018340  last_updated:000321 
MGKGVNTVFRPAEWDNSEEKERPKLEYLVTNKKTPPVELYLTAFASACSAEIVGYPFDMC
KTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLKLYGGISAMLFRHSLFSGIKMLT
YDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLTNPTELIKIQMQMEGQRRLRGE
PPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIAEFDLVD
NREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLSRLVREEGF
LAMYKGFIPYWMRVGPASVVFWMTFEQIRRFRGSEGY*
11. AC017377 comp(131488-132495) no introns 
EST AI947102  David Nelson
>CG9064|FBan0009064|CT26034|FBan0009064  last_updated:000321 
MDKAERDYWHLRSLEIEEEPRFPPTNVADPLTARNLFQLYVNTFIGANLAESCVFPLDVA
KTRMQVDGEQAKKTGKAMPTFRATLTNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYD
VFRRPFLYQNERNEEVLKIYMALGCSFTAGCIAQALANPFDIVKVRMQTEGRRRQLGYDV
RVNSMVQAFVDIYRRGGLPSMWKGVGPSCMRACLMTTGDVGSYDISKRTFKRLLDLEEGL
PLRFVSSMCAGLTASVLSTPADVIKSRMMNQPVDESGKNLYYKNSLDCVRKLVREEGVLT
LYKGLMPTWFRLGPFSVLFWLSVEQLRQWEGQSGF*
12. AC020205 8898-9190, 9260-10024, 10091-10257, = AC006496 two introns 33 
ESTs
AI517048, AI517037, AI404051, AI238330, AI389263, AI063177
AI292677, AI387048, AI404547, AI294348, AI389567, AI388110
AI293132, AI403941, AI389245, AI114161, AI387833, AI293024
AI386902, AI064405, AI063393, AI403869, AI388005, AI292968
AI514217, AI402309, AI134761, AA949677, AA817529, AA948886
AI515546, AI533469, AI401873  Robert Moxley
>CG9090|FBan0009090|CT25968|FBan0009090  last_updated:000321 
MFKSLFDAAQNSTFKSPFTSVNCQSATPTSAPTSTAVVTPTLKDVAPRQLTRNHNIAAAA
VAEGDSCEFGSNHYFLLCGLGGIISCGSTHTMVVPLDLVKCRLQVDPAKYKSVFTGFRIS
LAEEGVRGLAKGWAPTFIGYSMQGLCKFGLYEVFKKVYGDAIGEENAFLYRTGLYLAASA
SAEFFADIALAPMEAAKVKIQTTPGFAKTLREALPKMTAQEGVTAFYKGLVPLWMRQIPY
TMMKFACFERTVELLYKYVVPKPRADCTKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSK
LNQAKGASALDVAKQLGWSGLWGGLVPRIVMIGTLTAAQWFIYDAVKVFLRMPRPPPPEM
PESLKKKLGVTGEQ*
13. AC018265 gene 1 8643-8701, 9520-9654, 9713-10198, 
10259-10402, 10456-10600 = AC007889  4 introns 
ESTs AI108449, AI531531, AA804104, AI404803  these cover 
up to the third motif at PFDVVK, and the 3 prime UTR.  
The end of this gene matches a C.elegans EST T01651 at 78% 
identity, thus confirming the end of this gene.  David 
Nelson
>CG18347|FBan0018347|CT41675|FBan0018347  last_updated:000321 
MSSSATIATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGER
MYNSMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLT
SQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDK
GIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTA
ALAVNPFDVVKTRLQAIKKADGEKEFKGISDCIT*KTLKHEGPTAFFKGGLCRMIVIAPL
FGIAQTVYYLGVAEGLLGYQKK*
14. AC018265 11201-11256, 11319-11453, 11525-12293 
gene 2 = AC007889, AF145637 ESTs AI945223, 
AI946852  David Nelson
>CG12201|FBan0012201|CT10663|FBan0012201  last_updated:000321 
MLEQVEQKNQEQKKPQKFNVFPKIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERM
YTSIADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSR
ATLAGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERG
IFGLYKGVGATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSA
FMVTPFDVVKTRLQADGEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQM
FYFLGVGEKILGIERTKSV*
15. AC009385 97280-97481, 97544-97787, 97852-97984, 
98056-98388 = AC012807 three introns, no ESTs   
Robert Moxley
>CG18363|FBan0018363|CT41706|FBan0018363  last_updated:000321 
MPVFDDHFLGDCHDEPEGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQRQKRSILGTV
KRIHSLKGYLGFYDGFSAAILRQMTSTNIHFIVYDTGKKMEYVDRDSYLGKIILGCVAGA
CGSAFGIPTDLINVRMQTDMKEPPYKRRNYKHVFDGLIRIPKEEGWKALYKGGSVAVFKS
SLSTCSQIAFYDIIKTEVRKNISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSR
PGEFRTVFQASVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGICSLGGEK
YN*
16. AC012788, AC008286, AC008299 mRNA seq in Genbank
Y18197 ARALAR1 = AC012788, AC008286, AC008299, AC008317, AC008336
>CG2139|FBan0002139|CT6974|FBan0002139  last_updated:000321 
MPLTKSLPNSPSLLKRAGTEKLREVFLKYASIQKNGEHYMTSEDFVRKFLGLFSESAFND
ESVRLLANIADTSKDGLISFSEFQAFEGLLCTPDALYRTAFQLFDRKGNGTVSYADFADV
VQKTELHSKIPFSLDGPFIKRYFGDKKQRLINYAEFTQLLHDFHEEHAMEAFRSKDPAGT
GFISPLDFQDIIVNVKRHLLTPGVRDNLVSVTEGHKVSFPYFIAFTSLLNNMELIKQVYL
HATEGSRTDMITKDQILLAAQTMSQITPLEIDILFHLAGAVHQAGRIDYSDLSNIAPEHY
TKHMTHRLAEIKAVESPADRSAFIQVLESSYRFTLGSFAGAVAPTVVYPIDLVKTRMQNQ
RAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMGVAPEKAIKLTVNDLVRDKLT
DKKGNIPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQVAGEIASGSKIRAWSVVRELGLF
GLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKDGYNHPLTLLAAGAIAGVPAASLVTP
ADAIKTRLQVVARSGQTTYTGVWDATKKIMAEEGPRAFWKGTAARVFRSSPQFGVTLVTY
ELLQRLFYVDFGGTQPKGSEAHKITTPLEQAAASVTTENLDHIGGYRAAVPLLAGVESKF
GLYLPRFGRGVTAASPSTATGS*
17. AC018185 = 81% identical to AC020205 mRNA = AF137371
>CG4994|FBan0004994|CT15958|FBan0004994  last_updated:000321 
MFSSFFETARNSPFRTPMSMARCDAAAPVVEPQPVEGRQIAAAATPVANQQDSCEFGSTK
YFALCGIGGILSCGTTHTFVVPLDLVKCRLQVDQAKYKNLVHGFKVTVAEEGARGLAKGW
FPTLLGYSAQGLCKFGLYELFKVKYAEIIGEENAYLYRTSLYLAASASAEFFADIVLAPF
EAAKVKIQTIPGYANNFREAVPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKFACFERTVE
LLYKYVVPKPRADCTKGEQLIVTFAAGYIAGVFCAVVSHPADVVVSKLNQAKGASAISVA
KSLGFSGMWNGLTPRIIMIGTLTALQWFIYDGVKVALGIPRPPPPEMPASLKAKQH*
18. AC012929 = Y10618 
join(5191..5487,5563..5690,5768..6242)
alternative splicing of 5 prime UTR annotated gene in 
Genbank
>CG16944|FBan0016944|CT37582|FBan0016944  last_updated:000321 
MGKDFDAVGFVKDFAAGGISAAVSKTAVAPIERVKLLLQVQHISKQISPDKQYKGMVDCF
IRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLA
SGGAAGATSLCFVYPLDFARTRLAADTGKGGQREFTGLGNCLTKIFKSDGIVGLYRGFGV
SVQGIIIYRAAYFGFYDTARGMLPDPKNTPIYISWAIAQVVTTVAGIVSYPFDTVRRRMM
MQSGRKATEVIYKNTLHCWATIAKQEGTGAFFKGAFSNILRGTGGAFVLVLYDEIKKVL*
19. AC012929 = Y10618 
join(7347..7667,7744..7871,8169..8643)
alternative splicing of 5 prime UTR annotated gene in 
Genbank
>CG1683|FBan0001683|CT4708|FBan0001683  last_updated:000321 
MGDEGGGGGHGKGDLKSFLMDFMMGGVSAAIAKTAVAPIERVKLILQVQEVSKQIAADQR
YKGIVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDVYKSVFLGGVDKHKQFW
RHFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGGNREFNGLIDCLMKVIKSDGPI
GLYRGFIVSVQGIVIYRAAYFGFYDTCRDFLPNPKSTPFYVSWAIAQVVTTVAGIASYPF
DTVRRRMMMQSGLKKSEMVYKNTAHCWLVIAKQEGIGAFFKGALSNIIRGTGGALVLALY
DEMKKYF*
20. AC018177 COMP(38745-38861, 38252-38684, 38006-38182, 
37773-37945) three introns  ESTs AI110167, AA979538, 
AA951938 Ying Shen
>CG3476|FBan0003476|CT11691|FBan0003476  last_updated:000321 
MEEVEISTEKKSNPVKSFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVI
DCAARTFRYEGFRGFYRGISAPLVGVTPIYAVDFAVYAAGKRLFQTDDHIRLTYPQIFAA
GALAGVCSALVTVPTDRIKVLLQTQTVSNGPLLYNGTIDTAAKLYRQGGIRSLFKGTCAC
ILRDSPTGFYFVTYEFLQELARKKSANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRL
QSAPEGTYKHGIRSVFRNLMATEGPKALFRGILPILLRAFPSTAAVFFGVELTNDLLKA*
21. AC005709 = AC006243, AC009183, AC009354, AC007884, 
AC018192  Muthiah Kumaraswami no introns no ESTs 
>CG2857|FBan0002857|CT9770|FBan0002857  last_updated:000321 
MPENSVVVQLMQAVGGGIAGAATRTITQPLDVLKIRFQMQVEPVTNHKGSKYRGVIHAFK
SVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGI
AGCLGAVAAQPFDVVRTQMVAADPSSRRSQMNTFTGLRKVYKMEGWMGLSRGLPFTLVQV
FPLVGANFLFYKYLNAAVLMAKPPDQRQEIHGAFLFLNGALSGVLAKMIVYPADLLKKRI
QLMAFKQERKTFGRNPECPTILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYD
MFKRHYIAPMKEAEKNRQKLGKH*
22.AC020327 13228-13367, 13433-14314 one intron 
Swapna Menon
>CG4392|FBan0004392|CT14260|FBan0004392  last_updated:000321 
MNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHI
MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAA
GGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYA
GIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQGKT
IIQGHNWFYRNAIIILPFSLAAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQE
GLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGIKMS* 
23. AC020102 one intron 2 ESTs 
comp(33652-34401, 35642-35870) Ajit Kulkarni
>CG5254|FBan0005254|CT16777|FBan0005254  last_updated:000321 
MAGQQHDISHAKRAAFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHY
NGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTKPLFQFGSPTPTPLTF
SLAGLTAGTLEAIAVNPFEVVKVAQQADRQKKMLSTFAVAKGIIQQDGLGFSGLNKGITA
TMGRNGVFNMVYFGFYHSVKNVVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSR
IQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYYYDY
LLHNYS*
24. AC017981 17489-17642, 19697-19850, 19909-20263, 20652-
20814, 21800-21942 four introns no ESTs Allen Sickmier
>CG8026|FBan0008026|CT6130|FBan0008026  last_updated:000321 
MNPIKAQSTGSPKKFNVFAHVKYEHLVAGVSGGVVSTLILHPLDLIKIRFA*VNDGRTAT
VPQYRGLSSAFTTIFRQEGFRGLYKGVTPNVWGSGSSWGLYFML*YNTIKTFIQGGNTTM
PLGPTMNMLAAAESGILTLLLTNPIWVVKTRLCLQCDAASSAEYRGMIHALGQIYKEEGI
RGLYRGFVPGMLGVSHGAIQFMTYEELKNAYNEYRKLPIDTKL*ATTEYLAFAAVSKLIA
AAATYPYQVVRARLQDHHHRYNGTWDCIKQTWRYERMRG*FYKGLKASLTRVVPACMVTF
LVYENVSHFLLARRKRIETKEDASDV*
25. AC020252 comp(11793-12137, 12455-12941) one intron 
EST AI294955 Ji Ma
>CG4323|FBan0004323|CT14141|FBan0004323  last_updated:000321 
MSYNQRRIARWYFGGLASSMAAMVTHPIDLIKVLIQTQAEKLSVFQTTRKIVKEQGPLAM
YNGISASMLRQYTYTLARFGIYSVGSGAMDTSTMAGKTCLAAIAGGIGGFVGAPADLINV
RLQNDVKLPPEKRRNYKHAIDGLVRITREEGWKNLFNGSSMIALRGAFMTVGQIAFYEQS
KSQMIKLGMPDYMGTYILASMISSVVATTLTQPIDVVKTRRMNAAPGEYSGLGDVFVKTS
KEGPLAFFKGYVPSLSRLLPHTVLLFLGLEYLRTHFGYLPEPKQTGAFYRYDDVDD*
26. AC008182 comp(95417-96317) AC017552 AC009523 no intron 
Ji Ma
>CG9582|FBan0009582|CT27052|FBan0009582  last_updated:000321 
MATRSEETVRSLAHWQFLAGGLSGFIEIICFHPLDVVKTRMQIQGAHPFGGEVVYTCPLD
AIVKIYRYEGLSSLWKGIVPPICVETPKRGGKFLMYESLKPYFQFGAPQPTPLTHAMSGS
MAAILESFLVNPFEVVKITQQAHRGKRLKTLSVVKYIIKHDGYGIKGLYRGITALVARNA
VFHFGFFGFYNALKDIVPSPEDKTYNILRKVIIAGLASSLACVMSVTLDMAKCRIQGPQP
VKGEVKYQWTISTIKSTFKEEGFRSLFKGLGAMILRVGPGGAMLLVTYEYLFEFLKSQNI
\*
27. AC018172  comp(9696-10092, 10536-11242)  one intron 
EST AI946682 Yongkai Mo
>CG2616|FBan0002616|CT8885|FBan0002616  last_updated:000321 
MGRGPRPRSFTGGGGGGGTGGSGGSGGTSGGNNLKPERSAREDDAINRLTDSKSSHRKLL
SDPRFQIRPLQQVISACTGAMITACFMTPLDVIKTRMQSQQSPAHKCFFYSNGLMDHLFA
SGPNGSELASLRQRPQFSSSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQ
FKARYLQIYESHYNKRFTGLNVFHTSRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVR
TKMQAQRQTYAQMLQFVRSVVALQGVWGLWRGLRPTILRDVPFSGIYWPIYESLKQNLGH
GSQPSFSLSFLAGVMAGTVAAIVTTPFDVVKTHEQIEFGERVIFTDSPARDFGKKSTFSR
LTGIYRTHGVRGLFAGCGPRLLKVAPACAIMISTFEYSKSFFFHYNVRHHNEALLLDNPK
DTTVEDDDIE*
28. AC015137 = AC009740 comp(10280-10858,10969-11292) 
one intron  ESTs: AA978681, AA104694, AI389649, AI294952, 
AI294952, AI514635, AI239104, AI402446  Ryan Kendall
>CG6782|FBan0006782|CT21037|FBan0006782  last_updated:000321 
MDRSAFASLVSPYRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICITYPTEYVKTQ
LQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNA
VDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQRSGNPKFRGFAHGVGQII
KSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGDDHTKPVPKLVVGVFGAIAGA
ASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAI
TFMIYDSFMDLFN*
29. AC010671 gene 3 introns shown by \*
EST AI389787
>CG14208|FBan0014208|CT33821|FBan0014208  last_updated:000321 
MDPLRLTTLILSADPRYRIKPMQQVVSALVGGLITTFV*VTPLEVVKTRVQTQHAIRQRP
TVSKLCYVYHNGLMTHVCRSSDICVPKPGRDPQNLRPLRGAM*DAFVKIVCTSGFSGLWA
GLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQYYVPMASGICSRTIVVTAITPIEMV
RIKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYEAIKRAFS
VTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVL*PSVLSRMRQIYRLQGV
RGLYVGVMPRMLRVVPACAIMISTFEYSKSFFFHYNLDLQEAGTYYVKCQ*
30. AC010671 gene 3 introns shown by \*
EST AI402433
>CG14209|FBan0014209|CT33822|FBan0014209  last_updated:000321 
MAAASSQNPSKATMTDPRFRIRPLQQVASACTGAMVTACF*MTPLDVIKTRLQAQQQALL
SNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTI*DAFIKISRTEGIGSLWSGLSP
TLISALPSTIIYFVAYEQFKARFTDIHHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKM
QSQRMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFGVVEP
TFSFSFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFS*DNPPKQVATKSVAMRLAS
IYRMGGVPAIFSGLGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQHNRSNQATKGPGS*
31. AC019585 = AC009388, AC009249 introns shown by \*
ESTS AI064276, AA439218, AI386586, AA698575, AI946686, 
AI945569 David Nelson
>CG4963|FBan0004963|CT15898|FBan0004963  last_updated:000321 
MNIDDYESLPTTSVGVNMTAGAIAGVLEHVVMYPLDSVKVR*MQSLSPPTKNMNIVSTLR
TMITREGLL*RPIRGASAVVLGAGPAHSLYFAAYEMTKELTAKFTSVRNLNYVI*SGAVA
TLIHDAISSPTDVIKQRMQMYNSPYTSVVSCVRDIYKREGFKAFYRAYGTQLVMNLPYQT
IHFTTYEFFQNKMNLERKYNPPVHMAAGAAAGACAAAVTTPLDVIKTLLNTQETGLTRGM
IEASRK*IYHMAGPLGFFRGTTARVLYSMPATAICWSTYEFFKFYLCGLDADQYKSSITG
SSEPRKADYVLPRTTDEEQIDQEREAAKEKDTTATLHSAPTSVNASGAIKTVCELSTRPA
GPTINLHTRHTDVKSPYERGFST*
32. AC012986 30851-31404, 31468-31597, 31665-31979 
= AC007886, AC009733 two introns ESTs AI404722, 
AI516330, AI292585, AI542291 David Nelson
>CG7943|FBan0007943|CT5716|FBan0007943  last_updated:000321 
MKDDGAPNVAKTTDPPPPKRFPSGRAHSPHGDGEAGKLLHGSVFSKRFFGSFQWEEFACG
CGAAFVNIAVTYPIYKMIFRQMLHGVPITSAFAQLRHEGLGFLYRGMLPPLAQKTISLSI
MFGVVDGTRRYLVEDYRLNDYGAKVLAAVVAGSAESILLPFERVQTLLADSKFHQHFSNT
QNAFRYVVSHHGYRELYRGLEPVFWRNGLSNALFFVLREEASVRLPKRKSVSTRTVQEF
IAGAVIGASISTIFYPLNVIKVSLQSEMGQRSEGSWQACKRIYVERDRRIGNFYRGCPFN
TGRSFISWGIMNTAYENLKKLMQQQPPLPLASE*
33. AC017153 = AC004442 EST AI259170 5 introns 
David Nelson
>CG18317|FBan0018317|CT41569|FBan0018317  last_updated:000321 
MAQNTADTLIHLIAGG*SAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANG
GQSELLRPEQRRKLSTTILRNRSQPQ*IMAISHCGISSTTPKSMSIVQCL*RHIVQNEGP
RALFKGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLG*FVERDSPLVHIMSAASAGFVSST
ATNPIWFVKTRMQLDYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVI
YEFIKSKL*LEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIPYPHEVARTRLREEGNK
YNSFWQTLHTVWKEEGRAGLYR*GLATQLVRQIPNTAIMMATYEAVVYVLTRRFNNKSNE
FYDF*
34. AC005445 COMP(19104-19517, 18486-18939) one intron 
EST AI944701  Brian Bothner
>CG11196|FBan0011196|CT31268|FBan0011196  last_updated:000321 
MGEDSSRRLPRWWFGGVCAAIAVTGTHPIDLIKVQLQTQSQADRKTVGEILKGIHERSGI
LGFYNGISASWFRQLTYTTTRFALYEAGKDYVDTQKVSSKMALATFAGIVGGIVGVPGDV
VTVRLQNDVKLPEEKRRSYKHVFDGLFRIYKEEGVSSLFRGTVPAVSRAVLLTIGTNAAY
DQVKQMLKIATGAGEGVPLHFATSTIAGCIAVVITQPLDVIKTTFMNAQPGEFSGIGGAF
LSTAKQGPLAFYKGFIPALIRVSPNTIITFVLYEQARMRFGYLPPDK* 
35. AC019775 comp(52852-53040, 53240-53367, 54125-53426) 
= AC008205 2 introns ESTs AA697685, AA697686, AI402846, 
AI402855, AI403013  David Nelson
>CG5805|FBan0005805|CT18202|FBan0005805  last_updated:000321 
MTESSSSTKSRLAVAPTGVGGAAEGATYIRTIEWDMMNKTKFFPLSMLSSFSVRCCLFPL
TVIKTQLQVQHKSDVYKGMVDCAMKIYRSEGVPGLYRGFWISSVQIVSGVFYISTYEGVR
HVLNDLGAGHRMKALAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHAGSKGDINPLGIK
SWPGRSRLHISMDIGREIMRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQQELFRIC
PVWSHLFIQCVAGSLGGFTTTILTNPLDIVRARLQVHRLDSMSVAFRELWQEEKLNCFFK
GLSARLVQSAAFSFSIILGYETIKRIAVDEQYKHQIRW 
36. AC017782 comp(21596-21725, 20691-21524) = AC007856 
AC008218 one intron shown by \*  ESTs AI512269, AI405068, 
AI260461, AI518659, AA697477, AI403621, AI297023, 
AI455634, AA803073, AA697231 David Nelson
>CG1907|FBan0001907|CT2867|FBan0001907  last_updated:000321 
MSATSVQEAPKKAVATNAIKFLFGGLSGMGATMVVQPLDL*VKTRMQISGAGSGKKEYRS
SLHCIQTIVSKEGPLALYQGIGAALLRQATYTTGRLGMYTYLNDLFREKFQRSPGITDSM
AMGTIAGACGAFIGTPAEVALVRMTSDGRLPVAERRNYTNVANALARITREEGLTALWRG
SLPTVGRAMVVNMTQLASYSQFKTYFRHGPLQMEEGIKLHFCASMLSGLLTTITSMPLDI
AKTRIQNMKMVDGKPEYRGTADVLLRVARQEGVFALWKGFTPYYCRLGPHTVLTFIILEQ
LNQGYNKYVLGSNKSTGL*
37. AC020238 = AC007756 AC007757 three introns shown by \*
no ESTs David Nelson
>CG4241|FBan0004241|CT13930|FBan0004241  last_updated:000321 
MSLRLFIHSRAFGYECILRFSIHFLPFTISVRQKIDQVVISLISGAAAGALAKTVIAPLD
RTKINFQIRNDVPFSFRASLRYLQNTYANEGVLALWRGNSATMARIVPYAAIQFTAHEQW
RRILHVDKDGT*NTKGRRFLAGSLAGITSQSLTYPLDLARARMAVTDRYTGYRTLRQVFT
NWIKGPIAVGISFSTYDLIKAWLTELANLRRVEK*
38. AC014153 GENE 1 comp(17446-18381) = AC010665 
ESTs AI405292, AI134015, AI389947
>CG18418|FBan0018418|CT41906|FBan0018418  last_updated:000321 
MALVYGVEKKTVPTHMKFVMGGTSGMLATCIVQPLDLLKTRMQISGTLGTREYKNSFEVL
SKVLKNEGILSLYNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIV
AGAFGAMCGNPAEVALIRMMSDNRLIPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTV
GRAMVVNMVQLASYSLMKNQLHGYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQM
KVIDGKPEYSGTIDVLKKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKH
MLSDSLSDSVP*
39. AC014153 GENE = 2 comp(16188-17093) no ESTs
>CG7514|FBan0007514|CT2166|FBan0007514  last_updated:000321 
MAYSIEKKSIPGYMMYINGGLAGMLGTCIVQPLDLVKTRMQISATTGEYKSSFDCLLKVF
KNEGILALYNGLSAGLMRQATYTTARMGFYQMEIDAYRKQFNAPPTVLASMGMGILAGAF
GAMFGNPAEVALIRMMSDNRLPPAERRNYTGVLNAFVRIVKDEGVITLWKGCMPTVGRAM
IVNMVQLASYSQLKAAFSEYFSGLSLHIAAAMMSGLLTTIASMPLDMAKTRIQQQKTAEY
KGTMDVLMKVSKNEGIASLWKGFTPYLCRLGPHTVFAFIFLEQLTKAYKHIVLGDDSESN
I*
AC009216 120925-121173, 122098-122207, 122345-122834, 
122899-123071 = AC012693 45% TO CE5 no ESTs 3 introns shown 
by \*
>CG6492|FBan0006492|CT20203|FBan0006492  last_updated:000321 
MAAKTDESSPAVASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELATYP
LDLTKTRLQIQGEGAAHSAGKSN*MQYRGMVATAFGIAREEGALKLWQGVTPALYRHVVY
\*SGVRICSYDLMRKEFTQNGTQALPVWKSALCGVTAGAVAQWLASPADIVKVQIQMEGRR
RLMGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNR
LQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGR*GLLYRGSVDCLRQT
VSKEGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMIGASGY*
AC019525 200827-200898, 200975-201035, 201914-202725
2 introns shown by \* = AC010700
ESTs AI512559, AA697689, AI259003, AI532563
>CG1326|FBan0001326|CT2942|FBan0001326  last_updated:000321 
KEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSI
AGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIP
SLMLVSNPALQFMMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQ
RHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFM
AYEKIAGTVGMLLKRN*
AC014955 = AC006492 4 introns shown by \* ESTs AA949318,
AA142277, AI405082, AI114037, AA695733, AI402226, 
>CG7314|FBan0007314|CT22571|FBan0007314  last_updated:000321 
MGEVKDWRPFVYGGVASITAEF*GTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVK
ISREEGLRALYSG*IWPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERVWSNIL
CAAAAGAISSAIANPTDVLKVRMQVHGKGQHKGLLGCFGEIYKYEGVRGLWRGVGPTAQR
AVVIASVELPVYDFCKLQLMNAFGDHVGNHFI*SSFIASLGSAIASTPIDVIR*TRLMNQ
RPVSITMNGVVTAAATPKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNIIFFIT
YEQLKKY*
AC007817 = AC019578 4 introns shown by \* ESTs AA440846, 
AI542106 
>CG5646|FBan0005646|CT17838|FBan0005646  last_updated:000321 
MKWENYCDFVAGCFG*GACGVLVAHPLDTIKVWQQASNSSVVTAIQQIYSRNNG*VNGFY
RGMFFPFISTGAINSLLFGIYGNHLRQLRKVCHSDYQREQLEYHNMFLAGSVAGFVQSFI
ACPMELIKVRLQTAT*YYSDYLYGQRRTAFGTFKRILKTDGISGLYRGLLPM*IDVLPYG
IYMLAYRQGVDYMDRRDFVRRRRSQSDGSSVNLLVTTLAGAWAGVISWVCVIPFDVVKTL
MQADENHKYRGIFHCVRVQYRAYGWRSIFRGSWMLVARAVPFNAATFLGYEYALEWCQRW
NGTVY* 
AC014256 21309-21745, 21866-22307 = AC008356, AC008234 
one intron shown by \* no ESTs
>CG16736|FBan0016736|CT32113|FBan0016736  last_updated:000321 
MNNSDAGSSIEQFIKMPVYVGLLIKTTAQLLSHPMELVRVNMQANVIHHSRLSINHMFRL
MARHGLPGFYYGIVAACLRCTVHTMSTYTLFYNLQDNKYVLMLQPYNTSMVLGITGFWGG
VLATPFAKLAVIRQADLTRGSYERRK*NYRNFWRGLKCMYAKGGFTYLFTGWKINSISST
AVAVLYTPISDKVHTVISWFHRLDEPWLSDLITMALTGSIITVIMTPVDALATLTLNESS
HYGRTSYPYLYRKIIRKHGYKGFFFGWKPALMALIPHTVLATFVYRFLLDRYIT*