FB2024_03 , released June 25, 2024
Sequence Feature: Dmel\VT043924
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General Information
Symbol
Dmel\VT043924
Species
D. melanogaster
Feature type
FlyBase ID
FBsf0000447999
Collection
Associated gene
Genomic Location
Chromosome (arm)
3R
Sequence location

3R:18,958,000..18,960,179

Genomic Maps
Sequence Data
Length
Comments
Associated Information
Experimental Data
Progenitors
PCR template

genomic DNA

Primer 1
GACATGGGGGAAGGGATATCACACA
Primer 2
GAACGGGTCCATCCACACCACA
Comments
Collection Information
Collection: VDRC-VT
Symbol
Title
A set of GAL4 transgenes under the control of putative enhancer fragments.
Source and Progenitors
Species of derivation
D. melanogaster
Strain of derivation
Vector of progenitor construct
Description

A collection of stocks carrying GAL4 transgenes fused to putative enhancer fragments from selected D. melanogaster genes; a targeted insertion site is used.

Additional data
Sample preparation
Collection preparation

7,705 candidate enhancer sequences were PCR amplified from genomic DNA, covering 13.5% of the entire non-coding and non-repetitive genome; genomic fragments were 2kb on average, and typically overlapped ~400bp to avoid splitting enhancers. Candidate enhancer fragments were cloned into the pBPGUw vector, upstream of a Drosophila synthetic core promoter (DSCP) that contains the TATA, Inr, MTE, and DPE sequence motifs, and a Scer\GAL4 reporter gene. These constructs were integrated into the P{CaryP}attP2 target element on chromosome 3L by phiC31 site-specific integration, as described elsewhere (FBrf0205679).

Mode of assay
Data analysis
Cell lines
Observed in
Not observed in
Comments
Stocks (8)
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Secondary FlyBase IDs
    References (7)