FB2024_03 , released June 25, 2024
Transcript: Dmel\Spn85F-RA
Open Close
General Information
Symbol
Dmel\Spn85F-RA
Species
D. melanogaster
Annotation Symbol
CG12807-RA
FlyBase ID
FBtr0082171
Feature type
mRNA
Associated gene
Dmel\Spn85F
Evidence Rank
Length (nt)
2299
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 2 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GGTATTTTAGCCCTCTGCTCAGCCAGCTTTAACTTCAGTTTGGCAGCAGCAATCACGCGAATCAGTTCGAAACAGTAGCG
AGACGACCCCATACTATTCGCCATCCGTATCCGAGTCACTGCATCTGAAAAACTATGTGGAAAACGCTGGGGCTTGACGG
TTGACGAATTTCAGAATAGTCATCACCTTGAGTGCAGATCATCAGCTGGGCTAATTGAATCGGGATCGCAAAAAAAGTGG
AAAATAATGAACGGACTGCAATTGGGGGGATAGCGGATAAAGCTTGCCAATTTTTGTTGCTAAATAGCCGCGAACGCGAC
AATCAGAGTGCTAAGTGAGCTATCAATCAGTTCGGACCGAGGTCAGCTGCATTGTCATGGCTGGATTGGTGCTACTGTTC
ACCTGGCTGTTGGTCCACCTACTCCAGGTGGATGCCCACTATATACAAATTGACCATGAAGAATTTCGTGCCAGCGGCTT
TCCGCATCCGCACTTTCCGCCGCCTCCGCTAACGCCGCTGGATCATCTACCTCAGGTGCTGGCCGCCAAGGAGCTGACTC
CCGCCGAGGTGATGGTGGACCTGACCAACGACCTGACCCACCGCCTGCTCCACTACCATTCCATCCTGAACCGCAACAAC
TTCGCCTTCTCGCCCACTGCCTTGGTCAGTGTGCTGGTGGCTCTGTTCGAGGGTTCGGCCGGGAATACCGCCGAGGAACT
GCGCCATGTCCTGCAGCTGCCCAACAACAGGGATGTGACCCGCGTGGGCTACCGCGACATCCATCGACGACTGCGGACTT
ACTTTTTTGGCTCCGACAATCCACTGAAAGGACTCAGCTTGAACAAGGGCAATGTCACTGTTCTCAAGGACTTTGAGACG
GTTCTTATGTTTTACGGATATGACTTAAGTGTAGATATGCTCTCCTCCACACCAGCCAATCTCACATCAGATGCCGAGTT
GGTCAACACCACAATGGCCAGCAATACGACGACCATGGAAATGGATGCGGAAACCACAACGTCAAAGGATGCGGAGAGCA
CAACAGAAGAGCCGGCCACAACAACCACAGAGCCGCCGGCGACGACAACGGCAGAGCCACCAACCACCACCACAGAGACT
CCAGCGGAAACGGAGGCCACCACAGAAGCACCTGCTGCAACATCGGGTGAAGAGGAGGCCGCTGAGCCCGCTGGTGAGGA
TGAAGCAGCCGAGTTAGTGTCCGCTTTTGTAGCCGAGGAGGACTCCGAGCCTCTCTTGCGCATCCAGAAGGCTCGAGTCT
CCAGATTGCCCACCAGCAAACTACAGGCGCCGCTAAAGCATTCGAATCCAATCACTCCCAAGCCCATTTACCTGCCCAGT
GCGCGAACAGTGGCCATGCCAATGCCAATGATGGCTCGCCAGGTGGCGGAGCGAAAGCCACCAGGAACACGGCAAGTAAT
TTCTATTATAGCGCCATCCGTGCAACCAGCAAACATATCGGTGACTCGCAAGACGAAGACAGCACGATACAAGCGTCATG
CGATACCAGCATACAAGGATCTGGATGCAAATCTCTTTCTGACCCTCTTCAATCCGCACACGCATGTCCCGCACCACCCG
CTGCACTTTCCGCCGCCAGTGCCCGCTGCCTTTGCACCCATCACGAATGATTTTGAGCCACACTATATCGGAGAGGCGGC
CGAGGGAAAGTCCAACTATAACACGGATGTGATCAGCCACGTATTCTACTTGGGCAATCAACAGGTGGTGCACACCACCT
TCAAGGTATATAACGCAGTGCTGTACTACAAGTACTTTGAGCACCTGAAGATGAGCGTGCTGGAGTTGGAATTGGACACA
CCGGAGTACAACCTAATGATCCTGTTGCCCGACTACCACACGGATATTGTTGCAGCCGCCGCCTCCTTGAAACTGGGACC
AACCCTTCGACTGATGCGGAAGCAGTTGAAGCCACGCTGGGTGCAAGCCATCATTCCAGATTTCAAGCTGCACGGCACCA
TGTTTTTGACAAACGACTTGCAGAATATGGGAATCTGCGACGTATTCGAACCAAATCGCGCCGATTTCAGGCCCATGACT
GAGGAGAAGGGCGTCTACGTGCGACACATTGAGCAATCCATAGACGTCACCATCCGTACGCATCCCATCAATCAGCTGAA
GCGCAACTACGGCGCCCAATCGAAGCCCATTCAGATCTCTGTGAATCATCCGTTTCTGTTTTTCATCGTCGATCGCGACT
TGGACGTGGCTGTGATGTCGGGCCGCATACTGAATCCGCTGAACGTACGCATCCAATGA
          Other Products of this Gene
          Other Transcripts
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Spn85F-PA
          FBpp0081649
          640
          Derived from OTHER transcripts
          Comments

          Conservation across Drosophila species: final two exons identified by cross-species conservation data and supported by gene prediction. 8bp micro-exon plus splice junctions also 100% conserved in 11 of the 12 bases across 9 Drosophila species.

          Extended 5' UTR based on RNA-Seq and/or EST data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG12807-RA
          (FlyBase, 1996-)
          Spn85F-RA
          Secondary FlyBase IDs
            References (2)