FB2024_03 , released June 25, 2024
Transcript: Dmel\lncRNA:CR42862-RA
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General Information
Symbol
Dmel\lncRNA:CR42862-RA
Species
D. melanogaster
Annotation Symbol
CR42862-RA
FlyBase ID
FBtr0304059
Feature type
Associated gene
Evidence Rank
Length (nt)
5480
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 270 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      ACCCAGTTAAAAAGAGTGCGTTGTGTAGAACAGTCATAAGCAGTCCGCTAAGAGATTAGTAGCAACTACGAAGTGAAGTC
      GCAAACATGTGCAAGGCTGTTGTAGATTGTAAAGAAAGAATGAAGGATTGGAAGAGTGTGAGGAGACGCTGAGCAAACGG
      CCTTCAAATCGAAAGTGGTGTGAGTCATGGGCGCTGCCACCATCTATGCGAAAAGCCCACCAAGCATTGGTCACGGAGCA
      CACTCGTTTCCTGCTCCTCGCACGTTAATGGCAACGATGATGAGGAACGGAACACAAACAAGAAACTACGTCGCAGTGGG
      TCACTGAATGAATCCGCGTCCCGGTAGCAACAATAGTTCGACTATGGCTGGTACTGGTAAAGAAGAATCCCGAACACGAT
      CGTCGCAGTGACGATGACGTTGCGTTGTAGAATTACTGAGTGAGTCTCAACGTCTGTCCGAGTCCCCCCACGTCCACCGC
      CAGGCACTGAGTTCCGCAAACCAGCCGATGGCCGATTCTACACAGATCGCCGGAGCAGGGAGCAGCAGCAGCAAACACCA
      CCGAGTCTCCTCTGCATGCCAATGCCCATGCAATTCAGTCGCAGCGGACAGAACATTGGGGACAAGGCGGAATGCGCGCG
      GCAGCAGCTCCAGCTCGCATCAGCTTACCTGCGTTTGAAGCTCTCGTGCTGTTGCCAACCACCGACAATCACCACCTATT
      CTGCATTGAACGCTTCGCAGCTGCTGATCACCACCCACCCATCCGCACAGATACACGGTATTTGGTATATCAGCTGCGAA
      CAAAATATTGCTTTTTAAACAAAATTCCAGAGAAAAGAACAGCGGAGCATTCATTTATCATCGAAACGACATTGAGGAAC
      TGCTGTAATCCTTTCGGGTGAACACCGTGTGCGATTGTTATTGTGATATACAATTGAAAGGCAGTCGTCGAGTTTTTATC
      TTTCTGTCTTCGCTCGGTACACTTTTCTGGACTTCTCTTTCACCGTTTGTGATTTTGGCAAGCGATTATTGGACCCCTTT
      CCATTCAAACTCCCCATCTTCCTAATCAATAGGCTAGATAAGGCCGCTTAAATCTTTGTAGCTGCATGTCACAGTTGATC
      GGTTCCTGTGGGTGCTTTTGTTTGATGGGATTGCTTTGCGGTCTTCAAGTATTCACGGTCTTGAGGGCTCCAGACGAGGA
      TCTTTCCAGCAAATCTATGCGCAAGCAGGCGTCAAAGAGTTTGTAGACTAGGCACGACCATCACATTTCGTTTTTTTTTT
      TTTTTTATAGCGTTGCATCGCAGTTGATCGGTGCCTGCGGGCATGTATAAATGGAATCTAGCGAGGCGGAAGATTGAGGT
      CTTCAATTCTATGGCCCCAAACAACGCTCCTGCGACATCAATCCCTCAATTAGAATATGTGCAAAGAAGCATAACTAATC
      AACTGAACAAGCGTAAAAGCTAAGATATATGCAACCGATATCTTTTCTTTCGTATTTTGTAGAAATACATTTTCATGGAC
      TGATAATCTACAGAGAATACCAACTCGGCGCTATGGGCCCGCCCAATACATGTAAATTTGTGATTTTATGTCCAAAATAT
      TTTTTGTCTTGTAGCATTATGGGTGCAGTTGAATGTACCTGCCCATAATTAAAGCCTGCAAATCAAGAGTTATTGTTAAA
      CGCAAGAGGGAACATTTTGAACAGACTCAAATCTGTACACGGCCTCTGTAAGGAATGTGCAATCGATACCCTTTTCTCTC
      GTATTTTATAGAAATACATGTTGTGGAACAGTTTAGATGCTATGGAATTGTACCACGTAGTTGGACCACCACACAAATTT
      AATTAAAGTATGGAGAAAAACTTTTTTCTGTTTTCAAGCTGTTCCCGTTGAATGTGCCTGCCCACATCTCATCTATAGCT
      TCTGAGTAAATCCAACAGCGAACCGTCTATTCTTGGGACTTTAACAGCGTTTGAGAAATGGTTGGATCTTTACATTGCTC
      ATTTAATACTAAAGTTAATCTTCTTTCCCAATACCTAGACGCTTATTTATGAATTCATTGCAGTGTTTATACAGAGACAT
      CGGTTTCAAGCAACCAGTCTTATCAATCACATAGTTGACATACCAGTGCACATTTGCCTGTATTAAAACCAACCGAGAAC
      ATGTAGCAAAATTTCTTGAGGCAATGGGAATCAAATGCCAACTTGAAAGCAATAACACCAACACTAAGTCGTCGCAGTCC
      AACATCCATACTACACGGCGAATTCGAATTGAAGACGCTGGTCAGGTCTGAACCCAACTAGAACCCGCTTACACCTGTTT
      TTCAGCAATTTTTCTGGTCAGGATGTGGATTATCTGTCACAGAAACTTCGTTTGTCTTGAGCGTCGCTAAGATTGGCCGT
      TTGACCCTCCCAAAAGTGAGATTCTAAGCAGCCTTAAATTTATTTTACAATTCTTACAGCGGTGCCGCACAGTTGAGTGT
      GCCTGTGGGCATCGACTAAGCAATATTTGAACCGAAGGGCAGGGCAGTGGACCGTTCCGTTGATGATGATGTGCACCGCT
      CCGAGCTGGCTAAGTCTACTGCTGTGCTGCTGCAAATCGTTAAAGGGAACCCAAAACGATGCATCAAGTCCATCCAGTTA
      GGCTTCTCTTCCAAAGCACAGCTCACCTGCGCTACAACGACAACCAATTCAATCGCACCTGCTTCTGCAAGCGATCACAA
      TACGTCAAATGAGCATCGAGCACAGAAAGCAAGCAAACAACCAGGTTAATGGCTTCCTCTGCTGACTATGAAACTATACG
      CCTTTACATTGCAGCCAAGAAGCCTCTTAGTGCATATTCAACTACCAGCACAGAGCTTCTCAATGACTGGAGTAAGCATT
      GTTCTGACCGCATCGGACCCTGACCGAGTCCGACTTGGGTGCCTCTGGTCGCAAGATCTACATTAGGACAGAGCCAGAAT
      AGGAGCGCTTATCTAGCGCCATGATGTGCTGAGCTGAACCTAAGCACGTACTGCATTGCACCGCACAGATATGTGCGTTC
      GGTCCACGCTAAAGGGAATCAAATGCGTTTGGACCGAGAGCCGATACACCGCACCATCACCAGTATTCGCTGTGAAGTGA
      GCTGATGTGTTGTCGTTGTTACAGGGCTGCTGCTGCAACTGCTCCACAGGTATCCTCGCCTAGCGTCGGTAACTATCATT
      TGTCAATTTTAGCGGCCGGCAGTGTACATCAAACATTGAAGTCCGGAGTCCGGAGTGGCATGTAATTAACGGCAGATGTG
      AAACCAGCAAATGGTGCTCAAGCATTCCATTTTAAATCTGAAGATTGTCAGCAGTAACAGTTAAAGACTATCGACGCAGA
      CTTGCAGAACGAAGCGCAGGAAGGACAAAGCACTTCGATCACCAGCGGGTTGTCGTTTTACTTGCACTTTCCTTCCGTAG
      GTAGCCCAGAATTCGAGAAAGCCCATATCCATCGCAAAGGGAAACAAATGCGATTAGTGTTTGAAGACCAAGCTGGGTGT
      CCAATGTGTCGCACCACGATTAGCCAGTTGAGCCCATAACTCCTGGCCCGCCGATCATCGTACCGCAAAAGGGAATCAAA
      TGCGAGGTGGTACTACAGCAGTCGAGCTCCTCGTTGAGCTCCTGGTTTAAGTCGAACTCCCAACTGAGCTCCTGGTCGAG
      TTCTTCGCTTCAGCGTTTTTATCGTAAAGGGAATCCAACGCGATGTACAGCGACAGCGGCAGGCAGGGTCACCCAATACA
      CAAAGGTATACCAATATGATCAGAGTTCCAGTCCGTGCAATTACGCTTTTCAGAACCTCTCAAAAACTAATCTGCACGTG
      TCTAAATCTGGCTGCCATGCCAGGCGCGACATCAATCATATTCGCCATGTTGGTCTCAAAGGGAATCCAAGAGACACGCG
      CCCCGCGGTACAACCAACTGAAGACCAAATAGATTTTGTTATGCATTTATAACCAAGCATTTTAGAAGTCATATCCTCAT
      AATTTTTTCCTTTAGTGTTTCCAAATCTATGTATTCTAAACGAATCGTTTCATTATCTTGTAGGCTTTTATAAACCTTTA
      ATTTATTACTTGTAAACCTTTCCTCTAAGAGTCAATGCAGACATCCGACTTCGCTGACGATTGCATCGGGACTGCATTAC
      CCTAGGATAGACGGTCCGGTCTAGAAGTAGCAGCAAGAGTCAGTTAAATATCAGTACCGCTATTAGCAGAAGATTCATGG
      CAGTAAGATGATGTGGATGCACCGTACATAGACGTTTCAAACTGCAGAGGATCGTTTGACCCCCGAACCAAGGCAGGGAG
      ACCATACATACACAGGCGGAGGCAGTGCTGACCCTCAATACATTCGAGTATTTCAACACTCTACCTTTTACCTATATTTA
      CTGGGCATTCAATCACCAAATTCGCATCCTGGGTCTATTTGGAGCATATTAAGAACGAACACTACACGGCGTAGGAGCAC
      CACACGATTTGGTCATTTTTATTATGAGAAGTCCTAAAATCCTCCTCGGATCATTCCTCATTATCTGCATTTGGAGCAAC
      AAGTAGGCTGGAGGTATCATTTCTTCACTAAGCACCATCGATTTCACACTACTGGCTTGGGATAGCACCTAATTCTTTAC
      GAGTTTCGGCACTGATGACGACTTCAATCCTTGTTTCAACCCGTACCCCTTCGAACCAATATAAAAGTTGGATTGCATAC
      AGCTTTCGCTTCGCTACACACTGGTCGATTCTTTTTCTTTGTGAGGACCCTTCGTGAGGATATTAGATTTGTTGAAGAAT
      GATTCTCTAACTTGGACTGCGGCGTGGGATTCAGTCTAATTTAACCATCGACAGCGGCCTAGGAGTAAATTTGGACAGCG
      GCGTGGGATTTTCGGCTCTCAAAGACGACGGCGGCGGACGTACGGATAGTTCAGACTGCGGCGAGGGATATCAAGTTTTT
      GCAACGCGGGATTATTAGGGCGTTTAGGCCAGGGCGCTAGGAACCATATTCTTAAGACTACTGGAATTTACATCAATGGA
      GATGACTGCGGCGTGGGAGACGGAGATCGGGACTGCAGCGAGGGATCGAGGTTCTGGACAGCGGCGCGGGATTCTTATAA
      GATTGGACGGCGGCGTGGGACCTTTTTTGACGGCAGCGTGGGAGTTTAGGACTGCAGCGCGGGAATTTCTGACGGCGGCG
      AGGGATCCTCGGTTTAATTTTTCGGCAATTGGTCAGCCATCGCATTCCATATACATGCGTGTCACTCCATTTATTGATAG
      TTCAAAGCTGATATACTTAGGTGGCGTGATCAGCGTAATCACGCCTCCAAAAATACGCATCCCTGATTATCCCTTATATG
      GAAAATCTTCATTGAATATACATTTATTTACACTTCTGGAATACCGGAAAGCAACCCCAATACTTATGCCGATGATTCTA
      ATACATGAAACGATTTAAGATCACAATAAATTGATTTTTG
      
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      FBtr0309035
      5141
      FBtr0309036
      5427
      FBtr0309037
      5429
      FBtr0309038
      5420
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 2 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CR42862-RA
      lncRNA:CR42862-RA
      Secondary FlyBase IDs
        References (0)