FB2024_03 , released June 25, 2024
Transcript: Dmel\CG42724-RM
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General Information
Symbol
Dmel\CG42724-RM
Species
D. melanogaster
Annotation Symbol
CG42724-RM
FlyBase ID
FBtr0345076
Feature type
Associated gene
Evidence Rank
Length (nt)
5245
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 55 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      AAACTGGATTGTATTCACATCTCTAGCGGCAGAAAAGTGTAGAAAATTTTCAGGGGTTTTTAAAACGAAAAGTAAGAGGT
      TGCGTACAGTTAGATTTGTGTGCCATGGATGCGAGCTTAGAGGAGAGCATGGATAGCGATGGCGCCAGTTCGCCGATTAC
      CAAGACGGAGGCAACGGAATCTCCGCCAGAAGCGGGTCTCAATGGAAACGGCAGTGGTAGTGGTAGTACCAGCCAGGAGA
      CCCCAAATTATGGCGTTGCTATACTCAAGGAAAAACCCAGCGAGGCCCATAGGAGCAAGCCCTTCAATGCGTTTAGTGGT
      CGTCCCATCGGGGAGCACACCGCCCAGCAGCAGGCGCTGCAGCAACAACAACTGCAGCAACAACAACAGCCACAGCAGCC
      GCAGCAACAAGCTCCTTCCGGAGCAAATGGAGTCACAGGACCCCCGGAAATCTGGGTGGAAACCAAGGCGGAGGACGGTC
      GCTCATATTATTACCATGCGGTAACTAGGGAAACCACTTGGTCTCGACCCGATGGCCCCGCTGTCAAGATAATGACCCAG
      GCAGAGGTGGAGGAGATGGCCAAGCGACCTGCCCAGGCCGCGAAAACGGAAGCCAAGGCAGGCGAGACGTCGGTCGAGAT
      TCCGCCAGTGTCGTCACATCTTACCTCACAACCTCCGCCGCACCTGATGAGCCAGCCACCACCCAATGCGGCAGCACCGC
      TGCTTTCCCAGCCACCACCCAATGTACGGCAACAGCCACCACCAATGTTCCAGCCACCTGGAATGCAGGCGCCTCCTGGG
      TTCGGACAGCCGCCGTTTTGTATGCCACCTCCAACTTACGGATTTCCTGGAGGACCGGCACCAGCTGGGGCACCTTGGGG
      CGTGGGCATTCCGCCTTGGCAGCAACAGCAGCACATGCAAGACAAGCCAGCCAAGTCGCTAATCATTAAGCCGGGTGTTA
      TCGATCCGGCGGTTATAGCGCGAGCAGCAGAGTGGTCAGAGCATCGTGCTCCCGATGGAAGACCGTACTATTTCCACGCC
      GGTCGAGGAGAGAGTGTCTGGGAGAAACCGCAGGCGCTGAGGGACATGGAGGCCGCTCGCATGGCTGCCCACTCGGGCGT
      TGCGCCCGCTGTGGCAACAGCTCCGTCGGGACTACCACCACACTTGCTACCCAACCCTATGATGCATATGCCACCAGGAT
      CAGGGCCGCCGGGATTTGATCCGCATGCTGCTTTTGCGGCTGCTGCTGCAGCAATGAAAGCCAATTCGGAAAACACTAAG
      GCTGCACAGGCAGCTGCTTTGGAGAAAGAGGCTAAAAAGGCGGCGGAGGAGAAGCGAAAAAAGGAGGAGGAGCAGAAGAA
      GGCTGCGGCATCAGCCAAGCAAACGGACAAGAGTCGACCTGTGACAAGTACGCCCATCGCTGGAACGCCATGGTGTGTCG
      TATGGACTGGAGATTCCCGCGTCTTCTTTTACAATCCGTCAACTAGGACTTCGGTTTGGGATCGCCCCGAGGACTTGTTG
      AATCGTGAGGACGTTGACAAAGCGGTAAACGAACGTCCGGAGCAACTGAAGACTCCGCAAGAGAAGTCGGCTGAAGCCGA
      ACAGAAGTCCGGCGAGGAAGCAAATCAAGAGCAGGCTAAATCGCAAGTTCAAGCCCAGCAACTGGATCAGGTGCAGAGGG
      TGGATGCGGATGATGATGACGACGACGAGGTTATCAAGATACGCACAGAGTCTGAGTCTAGTGTGGAAGAGGTGCCAACC
      AAACGAGTTCGAATGATTTCCAAGTCGAAGCGGGCAGAGGATGCCGCCCTAGAGGCTGAGCAGCGGGCGGCCAAGGAGCG
      GGCCTTAGTACCACTAGAAATGCGCGTCACCCAATTCAAGGAAATGCTTCGAGAGAAGGACGTATCGGCTTTCAGCACTT
      GGGAGAAGGAGCTTCACAAGATCGTGTTCGACCCGCGGTATCTTCTGCTGACTTCGAAGGAACGCAAACAGGTATTTGAA
      AAGTATGTGAAGGATCGGGCCGAGGAGGAGCGTAAGGAGAAGCGGAACAAGATGCGCCAGAAGCGGGAGGACTTCCGCAG
      CCTAATGGAAGAAGCCAGGCTGCACGGAAAATCCTCATTCTCGGAGTTTAGCCAGAGGAACGCCAAGGATGAACGGTATC
      GGGCCATCGAGAAGGTTCGCGAACGAGAGAGTCTCTTCAACGAGTACATCGTGGAGGTGCGGCGCCGCGAAAAGGAGGAC
      AAGCTGTTGAAGAAAGAGCAGGTAGGCCTAGGGTATGCTGGAGCCCCTTACCCCATCACCTTACGTATCTTGATGTTTAA
      ACATAAATGCATATCTTTATATATATATTTAATAACTTACCCGTATGCCAAACGTATTTACATAATGTGATTGATTTTCT
      GTTAACTCTTAAACCATAAACAACGTGTGAATCGAAACCGAAACAAACCAAACTGAAAATGAAACCGAATCCGAACCCTG
      ACCGAATGCATTATCCCTCAATGTGTTGGGTTCCGGTGGTTTGCCACCCGATACCTTAGCCACTAGCTAGCAGGTTACAG
      CACAAATGCACCACCCAAAACACCAAAATACACAAGAGCAACAGCATCGAGAACCACCTGTACAACACTCTCGACGGTCT
      ATTCCGCCCGCCGTCTGCCATCGCCGTCCACTGATCTACTTGACCACGCACATGTTTGCAATCTGTGTGGTTGCCAAACT
      GAAAATTACCTGATAATCGTTGGTGTGATTTCCACTTCCCGAACTACGCCCCACGTCGCCCCTCTCGGATGTTTTATGCG
      ATGTGATGTGATGAAGAGGATGTTGCGATGATGTGATTGGCATTGGGATCATGATTGATGATGTTTGAAGTTCGCGATGG
      GCTCTCGGAGGGATGTCGCCGAGCAGGAAGCAGGCAGAAAGGGATTGTTCCAGAGATCCGGAGCGACTGCAGTTCGTGTG
      CAGGTGTCTGCGGCGCTAAGCAAACAGTATGAATAATACTTAATTTAATTAACCCACTATTTTCGTTTTGTTTACAAATA
      ATGTACACACTCAGCAGTTTGTCACCTGACCGAGGCAAGCCGAAGGAACCGAACTCAGCCCCATCCCCACCTGCACAGAC
      CAAAGACGAACGATATTCTAAAGCTATCTAAAGCCAAAATATCCAGATCTTTGCTCTGGCAGGTCTAGGCAGCGGCCCAA
      GTCGCTGGAAGGCTCTCTGCCCCATATTCTTACCATTTACCATATTTTTACTGTAGATCTATTGACTATTGTACCCTTCG
      GCCGTGCTGAAGTCTGAACATCAAGGCCTGCTTTTGTATAGAGAAATTAATGGGTTAGGTGGTCCGTTCGTTATAATTTT
      TGCTTTCTCCTCTGCATCTATAAAAAATGTTTGTAGCAAAAGATAACATAACAAATATTCGATCTGGCCGTGTCCGTCGA
      CGAGATCTCTGAAACTAAAAAAGCTGGAAATTTGATATTAGTTTTGGATGATTTTTGTCGATGCCAAAACATGAAATTCG
      TAAAACTTGTACCCGTAATCCACTCAGATAGGTTAGGGATATCTGATAATGGAGGAAATCGACTTGATTTAAGATGTCCA
      AATTTGTTTTCTGTGTGTCGCTTGAGACAGACCCAAATTCTCTACGCCAGCAGGACTTGAATTAATCCAACGTTCTTTTC
      CAGTTAAGTCTGAAATCGCTAACCAAACCCGCTCTCTTTCAGGCACAAATCGTGTAACTATGTTCTATAGCTTAAGAAAA
      ATAAGTCTAAGTCTTAAGTTAGGCAATTAAGCATAGAGTTTTAAGTGAAGCCGCAACAATTCGAGACCCCTCTAATTCGA
      TCTGTTTGTCGCATTTCTCTTCTCTTCCGCATGGCTGTCATGTCAATATTACTTTCACAAACACTTTAAAACTCTAGATC
      CGCAAGGACTTTCTGGATATGCTGCGAGAGCGTCACGACATCGAGCGCCACACCAGGTGGTACGACATCAAAAAGAAGTT
      TGAGTCGGATCCACGCTACCGTATGGTGGACTCCATGTACCGGGAGGAGTACTTCGAGGATTACCTGCACATTATGAAGG
      AGGAGAAGCGAAAGGAGCGGGAGATGCGTGAGCAACGGGAACGGGAGCGACATCGCGAACTTAAATCTGATCGGAAGGAG
      AAGGACAAGGAAAAGGACAAGGGTCGGAAGGATCGAGGACGCAGCCGTTCGAAAGACAAGGACCGCGAGCACAAGTCATC
      CAAAGAAAAGGATAAAGACAAGGAGGAAAAAAGCAAGTCGGAGAAAAGCAAGAAACGAGATACCACCCCAGAGGAGGGTG
      AACATCGTGAAGAGTCAGAAAGGGAAGAACGAGCCGGCAGCGACGACAGCGAGGTGGCTCGCCAACGGGAGAACGAGGCT
      GAGCAAAAGCAGAAGGAACGCGAGAAGAAGCTAAGGGTAGAGCAGAGTATAAGGGAACGAGAGAAGGAGGTGCAGCGAAC
      CCTGGCCGGTCATTTGAGGGATCGGGACAAGGAGCGCGAGCATCACATGCGCGAGGAGTGCATTGGTCACTTTACCGCTT
      TGCTGACAGATCTGGTGCGAACGCCGGACTTCACGTGGAAGGAGGTCAAGCGACAATTGCGGAAGGATCATCGCTGGGAA
      CTAATAGAAAGCCTTGATCGCGAGGATCGCGAGCGAAAATTCAACGAGCACATTGACAATCTGATGAAGAAGAAGAGGGA
      GCGATTCCGCGAAATGCTCGACGAGATTAGCACTCTTCAGCTTACTAGCACTTGGAAAGAGATTAAGAAGCTGATCAAAG
      AAGATCCGCGATACCTAAAATACAATTCGGACAAGGGCGAGCGCGAGTTCCGGGACTACATCAAAGATAAAACGATGACA
      GCGAAGACTTCTCTTCGGGAACTCCTGCAAGAGTGCAAATTTATTACTCACAAGAGCAGCGATCTCATCAAGGAAAATCC
      AAACCATCTCAAAGAGATTCAGGACATTTTGAAGAACGACAAGCGCTATTTGGTGCTCGATCACATGGAGGAGGAGAGGA
      ACACTATTGTGCTCGGCTTTTTGGAGGAGCTCAACAAACGCGGCCCGCCGCCACCACCCACAGCATCTGAGTCAACGCGC
      CGCAACAAGTAGAGTGGCATTTTAAATAAACTAATCAATTAAATCATAACAATTAAATTATTATACTAAGACGAAGTTCC
      GCATCTTCGAATATTTTAATTGAATAAAATACACACATTAAAGCG
      
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      FBtr0303013
      3688
      FBtr0303014
      2500
      FBtr0303015
      2805
      FBtr0303017
      4036
      FBtr0334545
      3589
      FBtr0345075
      4153
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      FBpp0311306
      761
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      FBpp0292135
      1123
      FBpp0292136
      763
      FBpp0292137
      669
      FBpp0292139
      763
      FBpp0306612
      1123
      FBpp0311305
      763
      Comments

      Based on evidence supporting retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide.

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      CG42724-RM
      Secondary FlyBase IDs
        References (0)