FB2024_03 , released June 25, 2024
Transcript: Dmel\Taf4-RI
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General Information
Symbol
Dmel\Taf4-RI
Species
D. melanogaster
Annotation Symbol
CG5444-RI
FlyBase ID
FBtr0345951
Feature type
mRNA
Associated gene
Dmel\Taf4
Evidence Rank
Length (nt)
4226
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 62 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GCAGTTCGCTTCTGGAGCGCACAGCATGCAACAACTCCGCCAACACCAACACAGGATGTGCGCAACTAGTTGATCGGAAC
AGGATCGCTCGCCCACACCAACACACAGAAGTCAGTGGAATAGGAGAAACACACTCGCCAATAACATAAACACCACACAG
CACGATGAACACCAGCCAGACAGCTGCCGGCAATCGCATCACCTTCACCAGCCAGCCGCTGCCCAATGGCACCATCAGCA
TAGCCGGCAATCCCGGCGCGGTCATCTCCACGGCCCAGCTACCGAATACCACCACCATCAAGACGATCCAGGCGGGGATC
GGTGGTCAGCATCAGGGACTTCAGCAGGTGCATCATGTCCAACAGCAGCAGCAGTCGCAACAGCAACAACAGCAGCAACA
GCAGACGCAATCCGCCGGTCAACCGCTGCTCAATTCAATGCTGCCGGCTGGCGTGGTGGTGGGCATGCGCCAACAGGCGC
CGTCACAGCAGCAGCAGAAGAATGTGCCCACCAACCCGCTCAGTCGCGTGGTGATCAACTCCCACATGGCGGGCGTGAGA
CCGCAGAGTCCATCGATAACTTTAAGCACACTTAATACGGGTCAGACCCCGGCATTGCTGGTCAAGACGGATAACGGATT
CCAGCTGTTGCGCGTGGGCACGACGACGGGTCCGCCGACGGTGACACAGACTATAACCAACACCAGCAATAACAGCAACA
CGACAAGCACCACAAACCATCCCACAACCACACAGATCCGTCTGCAAACTGTGCCGGCTGCAGCTTCTATGACCAACACG
ACCGCCACCAGCAACATCATTGTCAATTCGGTGGCAAGCAGTGGATATGCAAACTCTTCGCAGCCGCCGCATCTGACGCA
ACTAAATGCGCAGGCGCCACAACTGCCGCAGATTACGCAGATTCAAACAATACCGGCCCAGCAGTCTCAGCAGCAGCAGG
TGAACAATGTAAGCTCCGCGGGAGGAACGGCAACGGCGGTCAGCAGTACGACGGCAGCGACGACGACGCAGCAGGGCAAT
ACCAAAGAAAAGTGTCGCAAGTTTCTAGCCAATTTAATTGAATTGTCGACACGGGAACCGAAGCCGGTGGAGAAGAACGT
GCGCACCCTCATCCAGGAGCTGGTCAATGCGAATGTCGAGCCGGAGGAGTTTTGTGACCGCCTGGAGCGCTTGCTCAACG
CCAGCCCGCAGCCGTGTTTGATTGGATTCCTTAAGAAGAGTTTGCCTCTGCTACGACAAGCCCTCTACACAAAGGAGCTG
GTCATCGAAGGCATTAAACCTCCGCCGCAGCACGTTCTCGGCCTGGCCGGACTCTCTCAACAGTTGCCTAAAATCCAAGC
GCAAATCCGTCCGATCGGTCCTAGCCAGACAACGACCATTGGACAGACGCAGGTGCGTATGATAACGCCGAATGCCTTGG
GCACGCCGCGACCCACCATTGGCCACACCACGATATCGAAGCAGCCACCGAATATTCGGTTGCCTACGGCCCCGCGTCTC
GTCAACACTGGAGGAATTCGCACCCAGATACCCTCGTTGCAGGTGCCTGGTCAGGCGAACATTGTGCAAATACGTGGACC
GCAGCATGCTCAGCTGCAGCGTACTGGATCGGTCCAGATCCGGGCCACCACTCGTCCGCCAAACAGTGTGCCCACCGCGA
ACAAACTCACTGCCGTCAAGGTGGGACAGACGCAAATCAAAGCGATTACGCCCAGCCTGCATCCACCCTCGCTGGCGGCA
ATCTCAGGTGGACCACCGCCGACACCCACGCTGTCTGTTTTGTCTACGTTGAACTCCGCCTCGACCACAACGCTGCCCAT
ACCATCGTTACCCACGGTCCACCTTCCCCCCGAAGCTCTTCGAGCCCGTGAGCAGATGCAAAATTCGCTGAACCACAACA
GCAATCACTTCGATGCAAAACTGGTGGAGATCAAGGCGCCGTCGCTGCATCCGCCGCACATGGAGCGGATCAACGCATCT
CTCACACCGATTGGAGCCAAGACGATGGCAAGGCCGCCGCCTGCGATCAACAAGGCGATAGGCAAAAAGAAACGCGACGC
CATGGAAATGGACGCCAAATTGAACACATCGAGCGGAGGAGCGGCGTCCGCTGCGAACTCGTTTTTCCAGCAGAGCTCCA
TGTCCTCGATGTACGGTGACGATGATATCAACGATGTTGCCGCCATGGGAGGTGTTAACTTGGCGGAGGAGTCGCAGCGA
ATTCTCGGCTGTACCGAAAACATCGGCACGCAGATTCGATCCTGCAAAGATGAGGTATTTCTCAATCTCCCCTCGCTGCA
AGCTAGAATACGGGCAATTACTTCGGAGGCGGGACTGGATGAGCCGTCGCAGGATGTGGCCGTTCTGATATCGCACGCCT
GTCAGGAGCGCCTGAAGAACATCGTTGAGAAGTTGGCTGTGATAGCGGAGCACCGCATTGATGTCATCAAGTTGGATCCA
CGCTATGAGCCCGCCAAGGATGTGCGCGGTCAGATCAAGTTTCTCGAGGAGCTGGACAAGGCCGAGCAGAAGCGACACGA
GGAACTGGAGCGTGAGATGCTGCTGCGGGCAGCCAAGTCACGGTCGAGGGTGGAAGATCCCGAGCAGGCCAAGATGAAGG
CGAGGGCCAAGGAGATGCAACGCGCCGAAATGGAGGAGTTGCGTCAACGAGATGCCAATCTGACGGCGCTGCAGGCGATT
GGACCTCGGAAAAAGCTGAAGCTAGACGGCGAAACAGTCAGTTCGGGAGCGGGTTCAAGTGGCGGCGGAGTGCTAAGCAG
CTCGGGATCTGCGCCGACGACGTTACGGCCTCGCATAAAACGTGTGAACCTGCGCGACATGCTCTTCTACATGGAGCAAG
AGCGGGAGTTCTGTCGCAGTTCCATGCTGTTCAAGACATACCTCAAGTGATCGCTGCTGTTGCCCATCAATCGCACCGTC
TTCTCCTCGCCGATCCTCCTACTCCGTGGACTGTCGTGTTGTTGTTTTATACAGCTTTACGATTTCATCCACTTGCAATA
TATTTTAGCCTCAACTTTAAATGCGTCGCGTGTCCCCTGTTGTTGTTTCTTTTTAGTTAGGCGGCTCTATTTAATTTCTA
TTTTTACATTTATTTACATAAATCCTAAATTCTAATCGTATTTGATTTTAAGCCTAATTTAAAGCTCGTTTATTTTTCCA
ATAAATTCTCTGTAAAACTTAAACCAAACCAATCCAAAAACAAAACAAAACCAGAGTAAACGAAGAGAATAAAATAATAG
AGAGGAAAGTAAAAGAAGGTAAAAGAGAGCGCGCAGTCAGCGGGCGTTTGATTTGTAATTTGTAACATAATAATGTTTGC
ATCAACTGCATTGACGGCCTTATCTAAACGATATAAACATAATTATTAATATTTAATTATTTAGCTTAGTTTGTTAAACG
AAAACGAACCATAATTCCTAGATTTTAAGTAAAAAGCAAGGGCGCGTGAAGAGAAATCGAAACCGAATTACAGATAAAGG
TTTTTAAAACCAACTAGATCGAAACAAGTTCAGCAACAGCAAAACAAAAGAACACATCAAAAAAAGAACCGAAAAATATC
CATTTAAACATCCATTGAATTAGGTTTAGTTGTTTAAAAAAGATGTAATTTTTAATTACCCATAATGTATAAACGGAAAT
CAATCGTTAGGCAAGACCACAACAAACCCAACAAATTGTAAATACATTCTAGGCTACGGTTTTTCTAATAGATAACTAGG
TAAAAACGCAAACGTAATTAACAAATTATCGATGGCAAGGAGCGATGCGAGCGCAGACAACTTGGCACACCGAAAAAATA
TGTTTTTATTAGTGGCGCTCGTTCATCCATTAAGAATGGCGATTCATTAGGCTCCATAGATCCATAAATCCCCTAATCCA
ATCTGAACTACACACAAAATAGACAAATTTTATACAATTAGCTCGATAAATCTTGTAAAATAGAGTCCCGTAAAAAAATT
ATAACAAATAAATTGACAACAATTGATGTAATTCAGTAAACCTAAGCAAAAAGTGAAACCATTCTAAGCAAATTCTTTGT
GTGTAAAAATTAATATGATAAACAAAATGCAGATGCAACCGTAAACAGCGCATAGTTTGGTAGGCATATAACTGAATATA
TATATATTATTATTATTATGTTTTAACATTAAGCAAAAAAATAAAAGAAAAAATTGAGAAAACTTC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Taf4-RA
        FBtr0075448
        4916
        Taf4-RB
        FBtr0075449
        4574
        Taf4-RC
        FBtr0075450
        4423
        Taf4-RD
        FBtr0075451
        4166
        Taf4-RE
        FBtr0114589
        5134
        Taf4-RF
        FBtr0301911
        4622
        Taf4-RG
        FBtr0333290
        4756
        Taf4-RH
        FBtr0333291
        5011
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Taf4-PI
        FBpp0311865
        921
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Taf4-PA
        FBpp0075205
        921
        Taf4-PB
        FBpp0075206
        921
        Taf4-PC
        FBpp0075207
        851
        Taf4-PD
        FBpp0089259
        851
        Taf4-PE
        FBpp0113081
        1088
        Taf4-PF
        FBpp0291125
        921
        Taf4-PG
        FBpp0305485
        962
        Taf4-PH
        FBpp0305486
        1047
        Comments

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Taf4-RI
        Secondary FlyBase IDs
          References (0)