FB2024_02 , released April 23, 2024
Aberration: Dmel\Df(1)BSC624
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General Information
Symbol
Df(1)BSC624
Species
D. melanogaster
Name
FlyBase ID
FBab0045565
Feature type
chromosomal_deletion
Computed Breakpoints include

[11B1-11B1];[11D10-11D10];

Features within 11B1--11D10
Genomic Maps
Sequence coordinates
X:12,546,359..12,546,359 (Df(1)BSC624:bk1)
(Bloomington Drosophila Stock Center, 2008.8.7)
X:13,096,259..13,096,259 (Df(1)BSC624:bk2)
(Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)
Nature of Aberration
Cytological Order
Progenitor
PBac{RB}Chpfe02317
(Cook et al., 2008.9.29)
P{XP}d08636
(Cook et al., 2008.9.29)
Mutagen
FLPase
(Cook et al., 2008.9.29)
Class of aberration (relative to wild type)
chromosomal_deletion
(Cook et al., 2008.9.29)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Cook et al., 2008.9.29)
Breakpoints

11B1;11D10

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P+PBac{XP5.RB3}BSC624
(Cook et al., 2008.9.29)
Formalized genetic data
Genetic mapping information
Comments

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

(Bloomington Drosophila Stock Center, 2008.8.7)
Comments on Cytology

The cytological breakpoints of Df(1)BSC624 predicted from the Release 5 genomic coordinates of the progenitor P{XP}d08636 and PBac{RB}CG4351e02317 transposable element insertions sites are 11B1;11D10.

(Cook et al., 2008.9.29)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Pits
(Liaw, 2016)
Tis11
(Cook et al., 2008.9.29)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations

1: P{XP}d08636

(Cook et al., 2008.9.29)

2: PBac{RB}CG4351e02317

(Cook et al., 2008.9.29)
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The presence of P+PBac{XP5.RB3}BSC624 was verified using the PCR methods and primers described in FBrf0175003, with the substitution of the primer 5'-CCAATGCGTTTATTTCAGGTCACG-3' for the RB3' plus or RB3' minus primer in the Hybrid PCR protocol in the Supplementary Methods.

(Cook et al., 2008.9.29)
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Df(1)BSC624
(Cook et al., 2012, Cook et al., 2008.9.29, FlyBase Curators, 2008)
Df(X)BSC624
(Liaw, 2016)
Name Synonyms
Secondary FlyBase IDs
    References (6)