FB2024_03 , released June 25, 2024
Allele: Dmel\nompC2
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General Information
Symbol
Dmel\nompC2
Species
D. melanogaster
Name
FlyBase ID
FBal0008343
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Allele class
Nature of the Allele
Allele class
Progenitor genotype
Cytology
Description

Nucleotide substitution: G4418A.

Amino acid replacement: W1266term.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

G5359737A

Reported nucleotide change:

G4418A

Amino acid change:

W1266term | nompC-PD; W1266term | nompC-PE; W1266term | nompC-PF; W1266term | nompC-PG; W1266term | nompC-PH

Reported amino acid change:

W1266term

Comment:

G to A nucleotide change at the second or third position of the wild type Trp codon leads to a nonsense mutation (exact site of mutation unspecified). The mutation was annotated at the second base of the codon.

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Most homozygotes die at the third instar stage.

Crawling speed of homozygous larvae is reduced compared to controls.

nompC2/nompC3 third instar larvae show the same preference for 17.5[o]C over 14[o]C in a two-way choice test as do wild-type controls.

Mutant larvae exhibit a almost completely abolished touch response.

In wild-type animals, the antennal receiver moves in a non-linear fashion in response to sound. In the absence of sound the receiver oscillates spontaneously. In mutant animals the nonlinearity of the receiver is markedly reduced. The power of spontaneous oscillations is four times less than in controls. Instead of the single resonance observed in responses to sound, the spontaneous oscillations display several broad peaks.

Flies show severe uncoordination. Mechanoreceptor currents are reduced to 10% of normal. Action potentials are almost completely abolished.

External Data
Interactions
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Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Rescued by
Comments
Images (0)
Mutant
Wild-type
Stocks (0)
Notes on Origin
Discoverer
Comments
Comments

Due to a naming clash that goes back many years, two different alleles of nompC, with contrasting molecular lesions, were named nompC[2]. Thanks to user input, we have been able to disambiguate these two alleles. They are now called nompC[2] and nompC[a9]. The nompC[2] allele was generated in the Zuker lab by EMS (FBrf0127378). The nompC[a1] allele was made by Szidonya and Reuter (FBrf0047784) and published in 1988 as jf24[a1]. Allele jf24[a9] was renamed in Lindsley and Zimm 1992 (p. 353) as l(2)25Dc[2]. Allele l(2)25Dc[2] subsequently became nompC[2] based on a foot note in Kernan et al., 1994 (FBrf0073546) identifying l(2)25Dc as nompC. The references and data for jf24[a9]/l(2)25Dc[2]/nompC[2] have now been split from the nompC[2] FlyBase record and are associated with allele nompC[a9].

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Name Synonyms
Secondary FlyBase IDs
    References (8)