FB2024_03 , released June 25, 2024
Allele: Scer\GAL49-20
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General Information
Symbol
Scer\GAL49-20
Species
S. cerevisiae
Name
FlyBase ID
FBal0240966
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Allele class
Mutagen
    Nature of the Allele
    Allele class
    Mutagen
    Progenitor genotype
    Associated Insertion(s)
    Cytology
    Description

    Mobilisation of an X-linked P{GawB} generates this line.

    Allele components
    Component
    Use(s)
    Inserted element
    Mutations Mapped to the Genome
    Curation Data
    Type
    Location
    Additional Notes
    References
    Variant Molecular Consequences
    Associated Sequence Data
    DNA sequence
    Protein sequence
     
    Expression Data
    Reporter Expression
    distribution deduced from reporter (Gal4 UAS)
    Stage
    Tissue/Position (including subcellular localization)
    Reference
    Additional Information
    Statement
    Reference

    ScerGAL49-20 drives expression in all eight chordotonal organs of the PNS and in multiple medial and lateral cells of the ventral nerve cord. Labelling is also detected in a few cells in the brain.

     
    Marker for
    Reflects expression of
    Reporter construct used in assay
    Human Disease Associations
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Disease
    Interaction
    References
    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease-implicated variant(s)
     
    Phenotypic Data
    Phenotypic Class
    Phenotype Manifest In
    Detailed Description
    Statement
    Reference

    Inhibition (using Ctet\tetXTNT.UAS) of a subset of Scer\GAL49-20 cells (expression restricted using Scer\GAL80iav.PF) in larvae results in a significant reduction in locomotion speed, a significant increase in peristaltic wave duration, and reduced frequency of forward peristaltic waves, compared to controls; when the number of inhibited cells is reduced by addition of Scer\GAL80tsh-GAL80, there is no difference in peristaltic wave duration or frequency, compared to controls.

    Optogenetic activation (using Crei\ChR2T159C.UAS.YFP with blue light) of a subset of Scer\GAL49-20 cells (expression restricted using Scer\GAL80iav.PF) in larvae causes them to stop crawling; larval abdominal, but not thoracic, segments are paralyzed, unlike controls; neuromere-specific activation results in segment-specific body wall muscle relaxation, which can disrupt peristaltic wave propagation; when the number of inhibited cells is reduced by addition of Scer\GAL80tsh-GAL80, there is no difference in larval locomotion, compared to controls.

    Thermogenetic activation (using TrpA1UAS.(B).cKa at 32[o]C) of a subset of Scer\GAL49-20 cells (expression restricted using Scer\GAL80iav.PF) in larvae results in a significant reduction in locomotion speed and significantly increased peristaltic wave duration, compared to controls.

    External Data
    Interactions
    Show genetic interaction network for Enhancers & Suppressors
    Phenotypic Class
    Phenotype Manifest In
    Additional Comments
    Genetic Interactions
    Statement
    Reference
    Xenogenetic Interactions
    Statement
    Reference
    Complementation and Rescue Data
    Comments
    Images (0)
    Mutant
    Wild-type
    Stocks (0)
    Notes on Origin
    Discoverer
    External Crossreferences and Linkouts ( 0 )
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Scer\GAL49-20
    Name Synonyms
    Secondary FlyBase IDs
      References (2)