FB2024_03 , released June 25, 2024
Allele: Dmel\timUAS.gRNAx3.pCFD6
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General Information
Symbol
Dmel\timUAS.gRNAx3.pCFD6
Species
D. melanogaster
Name
FlyBase ID
FBal0356569
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
UAS-sgRNA-tim3x
Key Links
Transgenic product class
Nature of the Allele
Transgenic product class
Progenitor genotype
Carried in construct
Cytology
Description

UAS regulatory sequences drive expression of 3 different sgRNAs that target tim. The sgRNAs are expressed as a single polycistronic tRNA-gRNA cassette.

Allele components
Component
Use(s)
Encoded product / tool
Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

CRISPR/Cas9-mediated mutagenesis of tim in either tim-positive or Mai179-positive neurons, by the co-expression of timUAS.gRNAx3.pCFD6 and Spyo\Cas9UAS.P2 under the control of Scer\GAL4tim.PE or Scer\GAL4Mai179, respectively, leads to complete loss of circadian rhythmic behavior, although flies are still rhythmic under LD cycles.

Mutagenesis of tim in Pdf-positive neurons (i.e. Scer\GAL4P2.4.Pdf as driver of expression) leads to decreased circadian rhythmicity under constant darkness: although most individuals remain highly rhythmic, there is a significant decrease in the morning anticipation index, a significant increase in the evening anticipation index, and a small but significant increase in period, as compared to controls. Under LD cycles there are no obvious circadian phenotypes. There are no changes in the number of Pdf-positive neurons, as compared to controls.

Mutagenesis of tim in Mai179-positive, Pdf-negative neurons (expression under the combed control of Scer\GAL4Mai179 and Scer\GAL4P2.4.Pdf) does not have a major effect on circadian rhythmicity under constant darkness conditions: there is an increase in period, but rhythmic strength and both morning and evening anticipation indices are unaffected. There are no obvious circadian phenotype under LD cycles.

There are no circadian phenotypes when tim is mutagenized in the glia (i.e. Scer\GAL4repo as driver of expression).

External Data
Interactions
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Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments
Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
timUAS.gRNAx3.pCFD6
Name Synonyms
Secondary FlyBase IDs
    References (2)