Dm_2R:10851
Please see the JBrowse view of Dmel\mim for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Gene model reviewed during 5.46
Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated
Multiphase exon postulated: exon reading frame differs in alternative transcripts; overlap >20aa.
None of the polypeptides share 100% sequence identity.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\mim using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\mim in JBrowse2-55
2-56.1
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells.
Source for merge of: CG33352 anon- EST:fe1E4
Annotation CG33352 renamed CG33558 in release 4.1 of the genome annotation.
FlyBase curator comment: The symbol "CG9469" has been used erroneously in FlyBase to name 2 separate annotations (one on chromosome arm 2R, the other on arm 3R) in different releases of the genome annotation. The two annotations have been renamed in release 3.2 to avoid confusion; they are CG33352 (on 2R) and CG33343 (on 3R). CG33352 was labelled "CG9469" in releases 1 and 2 and was not annotated in releases 3.0 and 3.1 of the genome annotation. CG33343 was a new annotation in release 3.0 of the genome annotation and was labelled "CG9469" in releases 3.0 and 3.1.
Source for identity of: mim CG33558