Please see the JBrowse view of Dmel\cv-d for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.53
There is only one protein coding transcript and one polypeptide associated with this gene
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\cv-d using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: reported as crystal cell specific anlage
Comment: reported as plasmatocytes anlage
JBrowse - Visual display of RNA-Seq signals
View Dmel\cv-d in JBrowsePlease Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
Shows particularly robust cycling of transcription in adult heads, as assessed by expression analysis using high density oligonucleotide arrays with probe generated during three 12-point time course experiments over the course of 6 days. Shows significant change of expression pattern in circadian mutant background; decreased expression in per01, tim01 and increased expression in ClkJrk background.
Mutations in cv-d remove transverse veins or crossveins: crossvein specific. All anterior and posterior crossveins are removed leaving the sensilla campaniformia of the anterior crossvein. Slightly abnormal tarsal joints in the leg. Shows additive interactions with vn, ve, ci, cg, shv, ast, H, Vno, vvl, ri, tg, tt and ab.
ri, tg, tt, ab, cv, cv-2, cv-c and cv-d belong to the radius incompletus phenotypic group within the 'lack-of-vein' mutant class. Loss-of-function alleles at these loci remove stretches of veins in two or more longitudinal veins. Double mutants of this group have additive phenotypes, suggesting the genes are vein-specifi, and small lanceolate wings. Genes are therefore involved in whole vein-region specification rather than vein differentiation. ab and cv-d mutants have a pleiotropic effect on leg development.
Source for merge of: CG9622 CG9627
Source for merge of: CG9622 CG9625 CG9627
Source for merge of: cv-d CG31150
Annotations CG9622, CG9625 and CG9627 merged as CG31150 in release 3 of the genome annotation.
Source for merge of CG9622 CG9627 was a shared cDNA ( date:010720 ).
Possibly an allele of cv-b.