Please see the JBrowse view of Dmel\PIG-V for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.49
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\PIG-V using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\PIG-V in JBrowse2-81
2-84.8
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
The veg genetic complementation group was previously associated with the CG6657 annotation in FlyBase, based on flanking sequence of the "veg[k07202]" insertion allele. However, FBrf0218440 shows that alleles of the veg complementation group complement mutations that have been mapped to the CG6657 annotation and concludes that the phenotypes described for the veg complementation group are not due to an effect on CG6657 but are due to a defect in another locus. The CG6657 annotation has thus been split out int a separate gene from veg in release 5.49 of the genome annotation, and has been renamed "CG44239" to avoid confusion.
The embryonic peripheral nervous system phenotypes of the "veg" (vegetable) complementation group described in FBrf0131381 are not due to defects in CG6657, but rather due to defects in a neighbouring locus. Several of the original veg insertion alleles (vegk03402, vegk07202 and vegZ322) complement alleles that have been molecularly mapped to the CG6657 transcription unit and more precise mapping of the insertions in the mutant veg alleles indicates that they are outside of the CG6657 transcription unit.
Named "PIG-V" after the human ortholog.