opt1, EG:EG0002.1 , oligopeptide transporter 1
Please see the JBrowse view of Dmel\yin for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.50
3.0 (northern blot)
2.5 (northern blot)
None of the polypeptides share 100% sequence identity.
743, 737 (aa); 82.2 (kD predicted)
737 (aa)
yin-transfected HeLa cells exhibit proton-dependent high affinity alanylalanine transport.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\yin using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: maternally deposited
Comment: anlage in statu nascendi
Comment: rapidly degraded
Comment: anlage in statu nascendi
Comment: reported as procephalic ectoderm anlage
Comment: reported as procephalic ectoderm anlage
Comment: reported as procephalic ectoderm anlage
Comment: reported as procephalic ectoderm anlage
Comment: reported as ventral nerve cord anlage
Comment: reference states <3 hr AEL
yin protein is detected in the apical membranes of the midgut and rectal epithelium, and in basal regions of the rectal papillae. In the female reproductive tract, expression is in the oviducts, seminal receptacles, and spermathecal ducts. During oogenesis, yin is detected in the oocyte, and is associated with α yolk spheres in mature oocytes. In embryos, yin protein is detected associated with yolk spheres, and is detected in late stage embryos when the midgut has engulfed the central yolk mass. Low levels of expression are detected in the central nervous system neuropil, with slightly elevated levels in t e α and β lobes of the mushroom body. Expression is high in the fat bodies surrounding the central nervous sytem. Some expression is seen in the antennal nerve. Expression is also detected in a small number of premeoitic germ cell cysts in testes.
JBrowse - Visual display of RNA-Seq signals
View Dmel\yin in JBrowsePlease Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: yin CG34336
Annotations CG2913 and CG34336 merged as CG44402 in release 5.50 of the genome annotation. Merge supported by RNA-seq junction data.