To: Kathy Matthews <matthewk@XXXX>
Cc: e.ryderXXXX, Kevin Cook <kcookXXXX>, Rachel Drysdale
(Genetics) <rd120@XXXX>
From: John Roote <jr32@XXXX>
Subject: Re: RS lines for Bloomington
Date: Thu, 23 Sep 2004  13:21:48  \+0100
I have attached lists made by Ed of the GT lines, their coordinates
and their nearest genes, and another listing the accession nos. Do let
me know if this is OK.
The lines are all on a common isogenic X, 2 and 3 background (but note,
unfortunately NOT the same background as the Drosdel kit).
They all carry w1118 and are homozygous, with these exceptions:
GT-000008 lethal balanced over TM6B, Hu 20/20 Hu
GT-000078 semi-lethal balanced over TM6B, Hu, CyO floating 18/22 Hu,
8/22 Cy non-Hu flies have smaller, darker eyes, disrupted wings,
reduced bristles.
GT-000294 lethal CyO and TM6B, Hu 28/29 Cy, 23/29 Hu
GT-000526 semi-lethal balanced over TM6B, Hu 16/31 flies are Hu
\----------------------------------------------------------------------------
Accession: AJ833932
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000008, clone library P{GT1}
Within gene mapping: GT-000008 maps within CG8927
Accession: AJ833933
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000028, clone library P{GT1}
Accession: AJ833934
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000078, clone library P{GT1}
Accession: AJ833935
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000184, clone library P{GT1}
Accession: AJ833936
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000196, clone library P{GT1}
Within gene mapping: GT-000196 maps within CG12024
Accession: AJ833937
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000230, clone library P{GT1}
Within gene mapping: GT-000230 maps within eIF4AIII (CG7483).
Accession: AJ833938
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000270, clone library P{GT1}
Accession: AJ833939
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000294, clone library P{GT1}
Within gene mapping: GT-000294 maps within cdc2 (CG5363).
Accession: AJ833940
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000304, clone library P{GT1}
Accession: AJ833941
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000327, clone library P{GT1}
Accession: AJ833942
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000344, clone library P{GT1}
Accession: AJ833943
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000359, clone library P{GT1}
Within gene mapping: GT-000359 maps within Rgl (CG8865).
Accession: AJ833944
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000502, clone library P{GT1}
Within gene mapping: GT-000502 maps within Gef64C (CG32239).
Accession: AJ833945
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000504, clone library P{GT1}
Accession: AJ833946
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000508, clone library P{GT1}
Accession: AJ833947
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000526, clone library P{GT1}
Accession: AJ833948
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000530, clone library P{GT1}
Accession: AJ833949
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000558, clone library P{GT1}
Within gene mapping: GT-000558 maps within CG3428
Accession: AJ833950
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000656, clone library P{GT1}
Within gene mapping: GT-000656 maps within Sulf1 (CG6725).
Accession: AJ833951
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000718, clone library P{GT1}
Within gene mapping: GT-000718 maps within CG11170
Accession: AJ833952
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000741, clone library P{GT1}
Within gene mapping: GT-000741 maps within CG11790
Accession: AJ833953
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-000966, clone library P{GT1}
Within gene mapping: GT-000966 maps within CG8398
Accession: AJ833954
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-001020, clone library P{GT1}
Within gene mapping: GT-001020 maps within CG11523
Accession: AJ833955
Description: Drosophila melanogaster flanking sequence of P element insertion
P{GT1}GT-001092, clone library P{GT1}
\----------------------------------------------------------------------------
'GT-000008','3R','12010099','89B12','backward'
'GT-000028','2R','10279890','51E7','backward'
'GT-000078','3L','1569497','62A7','backward'
'GT-000184','3L','15253128','71C2','backward'
'GT-000196','3L','1837849','62B7','backward'
'GT-000230','3R','4139040','84F11','forward'
'GT-000270','3L','9317612','67A9','backward'
'GT-000294','2L','10378501','31D11','backward'
'GT-000304','2R','16675716','57F5','forward'
'GT-000327','3R','2358893','83F1','backward'
'GT-000344','2R','18280568','59D3','forward'
'GT-000359','3L','13865525','70C5','backward'
'GT-000502','3L','4715059','64B17','backward'
'GT-000504','2R','18314029','59D4','forward'
'GT-000508','3R','5913216','85F10','forward'
'GT-000526','3R','14989783','91F8','forward'
'GT-000530','2L','7429656','27F6','forward'
'GT-000558','3L','9445276','67B9','forward'
'GT-000656','3R','12139961','89B18','backward'
'GT-000718','2R','17226371','58C5','forward'
'GT-000741','3R','20864105','96B18','forward'
'GT-000966','3L','6573043','65C1','forward'
'GT-001020','3L','22183932','79D3','backward'
'GT-001092','3L','8431575','66D1','backward'
'\N','GT-000008','CG8925','proximal','4103'
'\N','GT-000008','CG8927','in_gene','0'
'\N','GT-000008','CG6046','distal','1799'
'\N','GT-000008','CG6072','distal','2575'
'\N','GT-000028','CG8092','proximal','2533'
'\N','GT-000028','CG8093','proximal','565'
'\N','GT-000028','CG11808','distal','44'
'\N','GT-000028','CG12954','distal','857'
'\N','GT-000028','CG8079','distal','2216'
'\N','GT-000028','CG8094','distal','2670'
'\N','GT-000078','CG13917','distal','4394'
'\N','GT-000184','CG7259','proximal','3357'
'\N','GT-000184','CG12327','proximal','1509'
'\N','GT-000184','CG7255','distal','120'
'\N','GT-000196','CG13936','proximal','4980'
'\N','GT-000196','CG12024','in_gene','0'
'\N','GT-000196','CG1956','distal','1894'
'\N','GT-000230','CG9615','proximal','4681'
'\N','GT-000230','CG11693','proximal','3369'
'\N','GT-000230','CG11694','proximal','1218'
'\N','GT-000230','CG11698','proximal','206'
'\N','GT-000230','CG7483','in_gene','0'
'\N','GT-000230','CG9613','distal','1481'
'\N','GT-000230','CG7459','distal','4315'
'\N','GT-000270','CG32040','proximal','3564'
'\N','GT-000270','CG4347','proximal','51'
'\N','GT-000270','CG32039','distal','121'
'\N','GT-000270','CG4446','distal','1410'
'\N','GT-000270','CG10923','distal','3729'
'\N','GT-000294','CG5091','proximal','3857'
'\N','GT-000294','CG5096','proximal','1362'
'\N','GT-000294','CG5363','in_gene','0'
'\N','GT-000294','CG5108','distal','572'
'\N','GT-000294','CG5102','distal','1986'
'\N','GT-000304','CG10080','proximal','904'
'\N','GT-000304','CG15674','distal','121'
'\N','GT-000304','CG10321','distal','2503'
'\N','GT-000327','CG15185','proximal','4613'
'\N','GT-000327','CG15183','proximal','109'
'\N','GT-000344','CG3092','proximal','3072'
'\N','GT-000359','CG8865','in_gene','0'
'\N','GT-000502','CG32239','in_gene','0'
'\N','GT-000504','CG12782','proximal','4927'
'\N','GT-000504','CG13540','distal','123'
'\N','GT-000504','CG3134','distal','794'
'\N','GT-000526','CG5637','proximal','3842'
'\N','GT-000526','CG11779','proximal','4166'
'\N','GT-000526','CG5558','proximal','1766'
'\N','GT-000526','CG5557','distal','177'
'\N','GT-000530','CG5958','proximal','3945'
'\N','GT-000530','CG5973','distal','81'
'\N','GT-000558','CG3654','proximal','1215'
'\N','GT-000558','CG3428','in_gene','0'
'\N','GT-000558','CG32036','distal','391'
'\N','GT-000558','CG32037','distal','2051'
'\N','GT-000656','CG6725','in_gene','0'
'\N','GT-000718','CG30279','proximal','3292'
'\N','GT-000718','CG11275','proximal','170'
'\N','GT-000718','CG11170','in_gene','0'
'\N','GT-000718','CG5465','distal','326'
'\N','GT-000718','CG5625','distal','3158'
'\N','GT-000741','CG31107','proximal','4952'
'\N','GT-000741','CG31110','proximal','2591'
'\N','GT-000741','CG11786','proximal','192'
'\N','GT-000741','CG11790','in_gene','0'
'\N','GT-000741','CG11791','distal','2066'
'\N','GT-000966','CG8368','proximal','4754'
'\N','GT-000966','CG8398','in_gene','0'
'\N','GT-001020','CG9063','proximal','3759'
'\N','GT-001020','CG9054','proximal','636'
'\N','GT-001020','CG11523','in_gene','0'
'\N','GT-001020','CG6395','distal','607'
'\N','GT-001092','CG6964','proximal','196'
'\N','GT-001092','CG6915','distal','142'
\----------------------------------------------------------------------------