FlyBase Insertion Report: Dmel\P{EPg}Vinc[HP10347]

General Information

Symbol

Dmel\P{EPg}Vinc^HP10347

Species

D. melanogaster

Name

FlyBase ID

FBti0075191

Feature type

transposable_element_insertion_site

Description

Inserted Element

P{EPg}

LINE ID

HP10347

Affected gene(s)

Vinc

Viability / fertility

Associated allele(s)

Vinc^HP10347

Stock availability

1 publicly available

Genomic Location

Chromosomal Location

X ( 2E3 )

Sequence Location

X:2,222,340..2,222,340 [+]

Target / Docking site

Genomic Maps

JBrowse

Member of Large Scale Dataset(s)

Dataset

TI_set_P{EPg}.HP

Description

Insertion lines from this collection were assessed for inclusion in the Gene Disruption Project collection.

(Bellen et al., 2011)

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EPg}. The P{EPg} construct carries the mini-white marker w^+mC, and Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator (FBrf0128569). The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.

(Staudt et al., 2005)

Detailed Mapping Data

Chromosome (arm)

Sequence Location

X:2,222,340..2,222,340 [+]

(Levis, 2009.8.13)

Orientation

(Levis, 2009.8.13)

Cytological location (computed by FlyBase)

2E3 (inferred by FlyBase from sequence location)

Cytological location (reported)

Insertion into Natural transposon

Comments concerning location

The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.

(Levis, 2009.8.13)

Sequence Data

Flanking sequence

AM270624

(FlyBase, 1992-)

Inserted Element

Construct

P{EPg}

(FlyBase, 1992-)

Size (Kb)

8.057

Component Allele(s)