FB2024_03 , released June 25, 2024
Allele: Dmel\spn-B1
Open Close
General Information
Symbol
Dmel\spn-B1
Species
D. melanogaster
Name
FlyBase ID
FBal0016033
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
spn-B056, spnB1, spnB056
Key Links
Genomic Maps

Nature of the Allele
Progenitor genotype
Cytology
Description

Amino acid replacement: G113R.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

G14328668A

Amino acid change:

G113R | spn-B-PA

Comment:

site of nucleic acid difference inferred by FlyBase curator based on reported amino acid change

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

spn-B1 mutants have a similar frequency of single-strand annealing repair (SSA) compared to controls in a P{wIw.FRT} hemizygous assay to study DNA double-stranded break repair when assayed at 38oC.

Mutants are weakly sensitive to X ray irradiation when irradiated at either 24-48 or 48-72 hours after egg laying (AEL). Little difference in viability is seen in irradiated at 0-24 hours AEL.

In contrast to wild-type ovaries, where the synaptonemal complex (SC) is always restricted to the oocyte by region 2b, spn-B1 mutant females show a significant delay in the process, with cysts with more than 1 cell in synapsis in region 3 of the germarium.

Hemizygotes are viable. Eggs derived from fs(1)K10unspecified; spn-B2/spn-B1 females show a broad spectrum of phenotypes ranging from completely dorsalised to completely ventralised. spn-B1/spn-B2 larvae show normal sensitivity to methyl methanesulfonate.

Hemizygous eggs exhibit either a strong or weak ventralised phenotype: eggs are longer than wild type and are completely symmetric along the DV axis or the eggs display fused dorsal appendages. Egg chambers of females exhibit a partially penetrant disruption in the positioning of the oocyte which can be located anywhere in the egg chamber. Almost all oocytes lack a karyosome and the oocyte chromosomes are arranged instead in thread-like figures with irregular shape. Germline clones in egg chambers are composed of wild type follicle cells, mutant nurse cells, oocytes that give rise to ventralised eggs and oocytes that lack a karyosome.

maternal-effect lethal. Similar to spn-A but normal eggs also recovered; eggs always unfertilized and abnormal eggs often long.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
NOT Enhanced by
Statement
Reference
NOT suppressed by
Statement
Reference
NOT Enhancer of
Statement
Reference
NOT Suppressor of
Statement
Reference

spn-B1 is a non-suppressor of radiation sensitive phenotype of spn-A093A

Phenotype Manifest In
Enhanced by
Statement
Reference

spn-B1 has oocyte phenotype, enhanceable by spn-D2

Enhancer of
Statement
Reference

spn-B1 is an enhancer of oocyte phenotype of spn-D2

Other
Statement
Reference
Additional Comments
Genetic Interactions
Statement
Reference

Has no effect on the frequency of X-Y chromosome nondisjunction seen in Df(1)X-1-53B males.

Double mutants with spn-D2 increases the oocyte mispositioning frequency. Double mutant stage 5-6 egg chambers with mus301094 exhibit a two-oocyte phenotype: the second pro-oocyte develops as an oocyte rather than a nurse cell. The double mutants delay but do not block the decision between the two pro-oocytes as one of the two cells always becomes a nurse cell eventually. Double mutant mothers with fs(1)K101 lay dorsalised eggs, the dorsal appendages form a collar around the entire circumference of the egg. This phenotype is indistinguishable from that of fs(1)K101 single mutants.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments
Images (0)
Mutant
Wild-type
Stocks (2)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (4)
References (9)