FB2024_03 , released June 25, 2024
Human Disease Model Report: cancer, epithelial, SCRIB-YAP1-related
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General Information
Name
cancer, epithelial, SCRIB-YAP1-related
FlyBase ID
FBhh0001381
Disease Ontology Term
Parent Disease
OMIM
Overview

This model of epithelial cancer uses the Drosophila Scribble polarity complex gene scrib in combination with a transcriptional co-activator regulated by the Hippo signaling pathway, the Drosophila gene yki. The highly conserved Scribble polarity complex plays a key role in determining cell polarity and cell proliferation in epithelial cells. One of the human gene orthologous to Dmel\yki, YAP1, is known to play a role in the development and progression of multiple cancers. See also 'cancer, epithelial, SCRIB-related' (FBhh0000587) and 'cancer, multiple, Hippo signaling pathway' (FBhh0000764).

When activated yki and RNAi directed against scrib are co-expressed in wing discs, large multilayered invasive tumors are formed that degrade the basement membrane. Larvae appeared bloated with overgrown wing discs, enter an extended larval life, and die during the pupal stage. The role of JNK signaling has been investigated in this system and compared to the scrib-Ras85DV12 cancer model system (FBhh0000585).

The Drosophila scrib gene is a cell polarity regulator and neoplastic tumor suppressor; there are two orthologous genes in human, SCRIB and LRRC1. The mammalian SCRIB gene has also been characterized as a tumor suppressor. Dmel\scrib is well characterized genetically: classical amorphic and hypomorphic mutations, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated. A tagged wild-type transgene of human Hsap\SCRIB has been introduced into flies; partial heterologous rescue (functional complementation) of homozygous Dmel\scrib loss-of-function phenotypes is observed.

Animals homozygous for loss-of-function mutations of Dmel\scrib typically die during the larval stage; imaginal discs exhibit morphology defects, such as increase in size (due to increased cell numbers) and disruption of monolayered epithelial organization.

In human, there are two genes orthologous to Dmel\yki, YAP1 and WWTR1. Classical loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated for yki; an amorphic allele has been created via gene targeting and recombination. Multiple UAS constructs of the human Hsap\YAP1 gene have been introduced into flies, including wild-type and genes with mutations eliminating phosphorylation sites.

Animals homozygous for an amorphic mutation of Dmel\yki die as late embryos and early first instar larvae. Somatic clones are difficult to recover and are very small, indicating that complete loss of function is virtually cell-lethal. Models of cancer involving Dmel\yki use a constitutively active form or drive overexpression of a wild-type gene.

[updated Aug. 2021 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: cancer, epithelial, SCRIB-YAP1-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information

YAP1 encodes a transcriptional regulator which can act both as a coactivator and a corepressor and is the critical downstream regulatory target in the Hippo signaling pathway; it thus plays a key role development, growth, repair, and homeostasis. YAP1 is known to play a role in the development and progression of multiple cancers. [Gene Cards, YAP1; 2021.08.03]

The SCRIB gene encodes a scaffold protein involved in cell polarization processes; it is involved in tumor suppression pathways (Gene Cards, SCRIB; 2021.08.03).

External links
Disease synonyms
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 2 human to 1 Drosophila; the second human gene is WWTR1.

Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 2 human to 1 Drosophila; the second human gene is LRRC1.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (2)
    Gene Snapshot
    scribble (scrib) encodes a scaffolding protein that is part of the conserved machinery regulating apicobasal polarity. It acts with the products of dlg1 and l(2)gl to distinguish the basolateral domain of epithelial cells and neuroblasts, via reciprocally antagonistic interactions with the aPKC/par-6 complex that impacts vesicle trafficking. The product of scrib also organizes synaptic architecture and is implicated in learning and memory. [Date last reviewed: 2019-03-14]
    Gene Groups / Pathways
    Comments on ortholog(s)

    Ortholog of human SCRIB and LRRC1 (1 Drosophila to 2 human); Dmel\scrib shares 33% identity and 45% similarity with the human SCRIB gene. The human LRRC1 gene encodes a much smaller protein, corresponding to the amino end of SCRIB and Dmel\scrib; it shares 57% identity and 73% similarity with Dmel\scrib within that extent.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Gene Snapshot
    yorkie (yki) encodes a transcriptional co-activator protein that is negatively regulated by Hippo signaling, which promotes its cytoplasmic localization. It functions together with DNA binding proteins, such as the product of sd, to activate transcription of a wide range of downstream targets, including genes that promote growth. [Date last reviewed: 2019-03-21]
    Gene Groups / Pathways
    Comments on ortholog(s)

    Moderate-scoring ortholog of human YAP1 and WWTR1 (1 Drosophila to 2 human). Dmel\yki shares 31% identity and 45% similarity with YAP1; it shares 25% identity and 34% similarity with WWTR1.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (91 groups)
      protein-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot
      proximity ligation assay, fluorescence microscopy
      colocalization, fluorescence microscopy, inferred by author, anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation, proximity-dependent biotin identification, proximity ligation assay
      proximity ligation assay, fluorescence microscopy
      anti bait coimmunoprecipitation, western blot, isothermal titration calorimetry, predetermined participant, x-ray crystallography
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, western blot, pull down
      anti tag coimmunoprecipitation, western blot
      anti tag coimmunoprecipitation, western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, western blot
      anti tag coimmunoprecipitation, anti tag western blot
      pull down, autoradiography
      anti tag coimmunoprecipitation, western blot
      pull down, autoradiography, two hybrid, anti tag coimmunoprecipitation, anti tag western blot
      RNA-RNA
      Interacting group
      Assay
      References
      luminiscence technology
      fluorescence technology
      RNA-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, quantitative reverse transcription pcr
      protein-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, anti tag western blot, protein complementation assay, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting, anti tag western blot, western blot
      anti tag coimmunoprecipitation, western blot, pull down, peptide massfingerprinting, anti tag western blot
      enzymatic study, western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, pull down, Identification by mass spectrometry
      anti tag coimmunoprecipitation, anti tag western blot, anti bait coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, western blot, anti tag western blot
      enzymatic study, western blot
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, tag visualisation
      coimmunoprecipitation, western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting, anti tag western blot
      anti bait coimmunoprecipitation, anti tag western blot, pull down, anti tag coimmunoprecipitation, Identification by mass spectrometry, peptide massfingerprinting, western blot
      pull down, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      enzymatic study, autoradiography, anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting, proximity ligation assay, fluorescence microscopy
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, pull down, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting, anti tag western blot, pull down, tandem affinity purification, Identification by mass spectrometry
      anti bait coimmunoprecipitation, peptide massfingerprinting, anti tag coimmunoprecipitation, anti tag western blot, western blot, pull down
      pull down, western blot, anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based, anti tag western blot
      anti bait coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot
      pull down, peptide massfingerprinting
      anti tag coimmunoprecipitation, peptide massfingerprinting
      enzymatic study, autoradiography
      anti tag coimmunoprecipitation, western blot, anti tag western blot
      anti tag coimmunoprecipitation, peptide massfingerprinting
      anti bait coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation
      anti tag coimmunoprecipitation, peptide massfingerprinting
      experimental knowledge based
      anti tag coimmunoprecipitation, anti tag western blot, pull down, anti bait coimmunoprecipitation, peptide massfingerprinting, surface plasmon resonance, predetermined participant, fluorescent resonance energy transfer, two hybrid, western blot, autoradiography
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot
      coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, peptide massfingerprinting, pull down, Identification by mass spectrometry, two hybrid, isothermal titration calorimetry, predetermined participant, molecular sieving, molecular weight, nuclear magnetic resonance
      pull down, anti tag western blot, anti bait coimmunoprecipitation, peptide massfingerprinting, western blot, anti tag coimmunoprecipitation
      pull down, western blot
      proximity ligation assay, fluorescence microscopy, anti tag coimmunoprecipitation, western blot, bimolecular fluorescence complementation
      anti tag coimmunoprecipitation, anti tag western blot, pull down, western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, anti tag western blot, pull down, peptide massfingerprinting
      anti tag coimmunoprecipitation, anti tag western blot, pull down, peptide massfingerprinting, enzymatic study, western blot, autoradiography, two hybrid
      Alleles Reported to Model Human Disease (Disease Ontology) (36 alleles)
      Models Based on Experimental Evidence ( 1 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 0 )
      Allele
      Disease
      Interaction
      References
      Models Based on Experimental Evidence ( 1 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 1 )
      Allele
      Disease
      Interaction
      References
      Models Based on Experimental Evidence ( 10 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 11 )
      Allele
      Disease
      Interaction
      References
      model of  carcinoma
      is ameliorated by CtBPHMS00677
      is ameliorated by CtBPJF01291
      is ameliorated by pucUAS.cMa
      model of  cancer
      model of  cancer
      model of  carcinoma
      is ameliorated by licGD7546
      is ameliorated by licJF01433
      is ameliorated by panJF02306
      is ameliorated by wgGD5007
      is ameliorated by Toll-7GD14417
      is ameliorated by Toll-7HM05230
      model of  carcinoma
      is exacerbated by Rho172F
      is exacerbated by RokGD1522
      is exacerbated by Toll-6GD14438
      is exacerbated by Toll-6GD35
      is exacerbated by kstGLC01654
      is exacerbated by sqhGL00663
      is exacerbated by zipGD1566
      is exacerbated by DefSK3
      is exacerbated by egr3
      is exacerbated by bskDN.UAS.cUa
      is ameliorated by msnUAS.cSa
      is ameliorated by Diap1UAS.cHa
      is ameliorated by Ire1GD3071
      is ameliorated by Ire1f02170
      is ameliorated by Xbp1GD4745
      is exacerbated by bskDN.UAS
      model of  cancer
      is ameliorated by hepr75
      is ameliorated by ykiB5
      is ameliorated by egr1
      is ameliorated by Ilp21
      is exacerbated by Ilp2UAS.cBa
      is ameliorated by Ilp53
      is exacerbated by InRUAS.Exel
      is exacerbated by chico1
      model of  carcinoma
      is exacerbated by aptGD1367
      is ameliorated by aptUAS.cEa
      is ameliorated by Gadd45KK104250
      is ameliorated by GlyatTH00482
      is ameliorated by Glyatc02982
      is ameliorated by Gadd45HMS01436
      Models Based on Experimental Evidence ( 13 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 17 )
      Allele
      Disease
      Interaction
      References
      model of  cancer
      is ameliorated by AlaRSGD8009
      is exacerbated by ArgRSGD14098
      is ameliorated by AsnRSGD7064
      is ameliorated by AsnRSKK100240
      is ameliorated by AspRSGD1339
      is exacerbated by CysRSGD13923
      is exacerbated by GlnRSKK109443
      is ameliorated by GlyRSKK107421
      is exacerbated by HisRSKK102374
      is exacerbated by LysRSKK101852
      is exacerbated by ThrRSGD1342
      is exacerbated by TyrRSGD11353
      is ameliorated by Ilp8KK112161
      is ameliorated by Ilp8MI00727
      is ameliorated by ImpL2GD6004
      is ameliorated by Lgr3Δ50
      model of  cancer
      is ameliorated by AktHMS00007
      is ameliorated by foxoTM.UAS
      is ameliorated by panΔN.UAS
      is ameliorated by wgHMS00794
      is ameliorated by wgJF01257
      is ameliorated by ImpL2HMC05809
      is ameliorated by domeGD2612
      is ameliorated by hopHMS00761
      is ameliorated by upd3HMS00646
      model of  cancer
      is ameliorated by Rox8EY02351
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      loss of function allele
      loss of function allele
      ethyl methanesulfonate
      loss of function allele
      ethyl methanesulfonate
      loss of function allele
      ethyl methanesulfonate
      References (3)