FB2024_03 , released June 25, 2024
Allele: Dmel\PolE1pl10R
Open Close
General Information
Symbol
Dmel\PolE1pl10R
Species
D. melanogaster
Name
FlyBase ID
FBal0194561
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Allele class
Mutagen
    Nature of the Allele
    Allele class
    Mutagen
    Progenitor genotype
    Cytology
    Description

    Nucleotide substitution: T444C

    This allele contains a single base pair substitution in exon 1 of DNApol-ε. As in Hsrω05241 there is also a 240bp deletion in the 5'UTR of CG4408.

    Mutations Mapped to the Genome
    Curation Data
    Type
    Location
    Additional Notes
    References
    Nucleotide change:

    T23348232C

    Reported nucleotide change:

    T19173954C

    Comment:

    Reported as T19173954C in R5 coordinates. This is a silent substitution but occurs in a putative 5' splice enhancer sequence. As in Hsrω05241 there is also a 240bp deletion in the 5'UTR of CG4408.

    Variant Molecular Consequences
    Associated Sequence Data
    DNA sequence
    Protein sequence
     
    Expression Data
    Reporter Expression
    Additional Information
    Statement
    Reference
     
    Marker for
    Reflects expression of
    Reporter construct used in assay
    Human Disease Associations
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 1 )
    Disease
    Interaction
    References
    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease-implicated variant(s)
     
    Phenotypic Data
    Phenotypic Class
    Phenotype Manifest In
    Detailed Description
    Statement
    Reference

    DNApol-εpl10R homozygous embryos hatch normally and initially develop like their heterozygous siblings. However, at the beginning of the third instar larval stage they begin to show developmental and other defects. Early to mid third instar DNApol-εpl10R larvae gradually become akinetic and persist as thin larvae for several days. They show small melanotic patches. The puparia formed are abnormal, being markedly narrower and elongated. All homozygous DNApol-εpl10R progeny die as late larvae/early pupae. No phenotypes are seen in DNApol-εpl10R heterozygotes.

    All imaginal discs and brain ganglia in 6 or 9 day old DNApol-εpl10R larvae are very small, similar to those in second instar wild type larvae. The discs are misshapen and difficult to identify. The salivary glands are also small in size. No reduction is seen in the number of endoreplicating cells but the size of the cells is reduced compared to wild type. The number of diploid imaginal cells in salivary gland ducts is significantly reduced. The overall dimensions of the gut are generally comparable to wild type. However the number of gut imaginal cells is reduced in DNApol-εpl10R mutants, with 7-10 cells in each cluster compared to 18-20 in wild type.

    The cells of DNApol-εpl10R mutant wing discs are similar in size to wild type, but the discs contain fewer cells.

    Ommatidial units are completely absent in the eye discs of 6-9 day old DNApol-εpl10R mutant larvae.

    DNApol-εpl10R mutant clones can rarely be recovered in imaginal discs. Those that are seen contain fewer cells compared with controls.

    DNApol-εpl10R mutant larvae show increased sensitivity to DNA damage in response to bleomycin compared to wild type flies. Most of the larvae die at the first instar larval stage and none reach the pupal stage. Wild type controls reach adulthood and appear healthy and fertile. Comet tail analysis shows that a higher proportion of DNA in DNApol-εpl10R mutants is damaged than in WT, even under conditions of normal feeding. The proportion of damaged DNA due to bleomycin increases even in wild type, but the increase is more dramatic in DNApol-εpl10R larvae.

    l(3)pl10RR mutants exhibit abnormal distribution of Hsrω speckles and causes prolonged larval life and pupal lethality when homozygous. In all l(3)pl10RR homozygous late larval cells, the Hsrω transcripts localise to one or a few large clusters, this appears to be associated with prolonged larval life and pupal lethality.

    l(3)pl10R mutants exhibit abnormal distribution of omega speckles and causes prolonged larval life and pupal lethality when homozygous. In all l(3)pl10R homozygous late larval cells, the omega transcripts localise to one or a few large clusters.

    External Data
    Interactions
    Show genetic interaction network for Enhancers & Suppressors
    Phenotypic Class
    NOT suppressed by
    Statement
    Reference

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by pntKG04968/pnt[+]

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by pnt[+]/pnt07825

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by Sec1301031/sec13[+]

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by RpS3[+]/RpS3Plac92

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by ATPsyn-Cf6[+]/ATPsynCF6EY22484

    PolE1pl10R has lethal | recessive | third instar larval stage phenotype, non-suppressible by CG42828[+]/CG42828f01032

    Enhancer of
    Phenotype Manifest In
    Enhancer of
    Statement
    Reference
    Additional Comments
    Genetic Interactions
    Statement
    Reference

    pntKG04968 complements the lethality seen in DNApol-εpl10R.

    pnt07825 complements the lethality seen in DNApol-εpl10R.

    sec1301031 complements the lethality seen in DNApol-εpl10R.

    RpS3Plac92 complements the lethality seen in DNApol-εpl10R.

    ATPsyn-Cf6EY22484 complements the lethality seen in DNApol-εpl10R.

    CG42828f01032 complements the lethality seen in DNApol-εpl10R.

    l(3)pl10RR heterozygous flies expressing Zzzz\CAG127Q.Scer\UAS.T:Ivir\HA1, induced by Scer\GAL4GMR.PF, exhibit black necrotic patches that cover almost the entire eye and a reduced eye size. The aggravation of neurodegeneration by a single copy of the l(3)pl10RR mutant allele indicates that this is a dominant enhancer of poly-Q toxicity.

    Xenogenetic Interactions
    Statement
    Reference

    The neurodegeneration phenotype caused by expression of Zzzz\CAG127Q.Scer\UAS.T:Ivir\HA1 under the control of Scer\GAL4GMR.PF is enhanced by l(3)pl10R/+; black necrotic patches cover almost the entire eye and eyes are reduced in size.

    Complementation and Rescue Data
    Comments
    Images (0)
    Mutant
    Wild-type
    Stocks (0)
    Notes on Origin
    Discoverer
    External Crossreferences and Linkouts ( 0 )
    Synonyms and Secondary IDs (8)
    Reported As
    Symbol Synonym
    DNApol-epsilonpl10R
    DNApol-ε255pl10R
    DNApol-εpl10R
    PolE1pl10R
    l(3)pl10RR
    Name Synonyms
    Secondary FlyBase IDs
      References (3)